| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1514 |
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| Symbol | |
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| ID | 8019159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1598492 |
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| End bp | 1599475 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644830292 |
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| Product | type IV / VI secretion system protein, DotU family |
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| Protein accession | YP_002981473 |
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| Protein GI | 241663113 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.568631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.950361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAC GTCAGCGTTC AAAAAAAGCG CCAGTCTGGC TGGCCGATCA AGGTGCGAAA
CCTGGCAAGC CGCAGGCCAA GTCCGAGCGG AAAGCGCCTG CGGCTGAGAA GAAACTCACG
GATATCAAAG GCGCCATCCA TGGCAATGAC GCCAAGCCGG TGACGGTCGA GGCGTACAGT
GAAGCCGCGC TTCAGAAAAT GCTGGATCGC ATCAAGCGAA CGGAGCATCC GTGGGGCTTG
AGAATCGCAG CAGGTCGACT ACTCAGGGCC ATCGCCGATC TGTCTTCCAT CAAGCACCTC
AGACGCGGTC AAATCGAGCA CCTGCGCGCC CTGCTGGTAC TCGAAATCCA GACCTTTGAA
AAGCTTTGTC ATCGGGCGGG CTTTGATCGT CGTCACATCG TGGGGGCGAG CTATTGCTTG
TGTGCTGCGT TGGATGAGGA GGCGCATCAC ACCCCATGGG GCGGTGGCGG CAAAGACGGC
ATTGGCGCAT GGTCGCAACA CTCCCTCACC GCGCAGTTCC ATGGCGACCG CGATGGCGGC
ATCAAGGTGT ATCAGCTGCT CGCGCGCCTG GTCGAAGACC CCGATGCCAA TCTACCGCTG
ATTCACTTGA TTTACGTCAT CATGAGCGTG GGCTTCATGG GGCGCTACCG CGTCGAGGGG
AATGGAGAAC GCGAACATCA ACTGTTGCGT GAAAAGCTCT ACGCGATCGT GAAGGCTAGA
GTTCCCCCCC TCCCGCGGGA GCTTTCACCG TCATTACACG TCGCCACCGA ACGCAACCTC
AAGCCGATCT CCTGCGTTCC TGTGTGGTTG ACTGCAGTCG TTGGCCTGGT GATTGCCTCT
GGAACCTATG CGTACTTCCA ATTCAAGCTG CACAAGGCAC AGGAGGCAGT CTTGCAAACG
GTTGAAGCCA TCAATCAGAT GGTCTCCGCC CCTCCGCCTT TGCCGGCGCT CGACGCGCCA
AAATCCCGAG CGAGCGGCCG ATAG
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| Protein sequence | MAKRQRSKKA PVWLADQGAK PGKPQAKSER KAPAAEKKLT DIKGAIHGND AKPVTVEAYS
EAALQKMLDR IKRTEHPWGL RIAAGRLLRA IADLSSIKHL RRGQIEHLRA LLVLEIQTFE
KLCHRAGFDR RHIVGASYCL CAALDEEAHH TPWGGGGKDG IGAWSQHSLT AQFHGDRDGG
IKVYQLLARL VEDPDANLPL IHLIYVIMSV GFMGRYRVEG NGEREHQLLR EKLYAIVKAR
VPPLPRELSP SLHVATERNL KPISCVPVWL TAVVGLVIAS GTYAYFQFKL HKAQEAVLQT
VEAINQMVSA PPPLPALDAP KSRASGR
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