Gene Rpic12D_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1508 
Symbol 
ID8019153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1593121 
End bp1593774 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content58% 
IMG OID644830286 
Producthypothetical protein 
Protein accessionYP_002981467 
Protein GI241663107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.855071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.840744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC AATCGATCAG GGCACTTTTG CTGATCAGCC TCGCCCTCCT TGCCGGCTGC 
GATGACCGCG CAGCCATGGC GGCACGCGAT GATGGCGACC CCATGCAGTA CGGCGGCGTC
AGCGGATTGA ACTACACGCC CTACTACATC CACACCTTCA ACGTGAAAGG CCACGATGAC
AACGGCATCA GCGGCGGCGG ACCAAACATC ATGCCCGCCA CCCCAGACAA CATGCCATCC
GGAGGAGGCA AGGAAACGTG TTGCGCCGCC TTTCCCAAGA AATGGCGTCC TGGCCTGAAG
GTCACGGTGC GATGGATTGC CAACAAGAAG CTAGACGGTA TTGCTTGGGG GGCTTGGTAC
AAAGCCGAAG CAGAGATGCC CGAGTATGGC CCAAGGGCAG GCGCACTCTT TGCCATCTTT
CTTCCCGGAG ACCGCGTGAA GCTGATGGTG CAGGACGGTA ACGCAAATGG ACACAACAGT
CTTGAAGTCA AACCAACTGA CGGCGACCCT TATGTAGCCA CTGGAACGGT GGACGAAGAA
CTCACCCGCC AAGACGAAGA GCGTCGCGAG AAGCAACGTC AAATGAAGAT CGCCCGAGAA
GCCGAATTGG CCCGCGAAGC CGAACCCAGA AAGCAAGAGG AGACAAGCCA ATGA
 
Protein sequence
MKTQSIRALL LISLALLAGC DDRAAMAARD DGDPMQYGGV SGLNYTPYYI HTFNVKGHDD 
NGISGGGPNI MPATPDNMPS GGGKETCCAA FPKKWRPGLK VTVRWIANKK LDGIAWGAWY
KAEAEMPEYG PRAGALFAIF LPGDRVKLMV QDGNANGHNS LEVKPTDGDP YVATGTVDEE
LTRQDEERRE KQRQMKIARE AELAREAEPR KQEETSQ