Gene Rpic12D_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1506 
Symbol 
ID8019151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1591612 
End bp1592085 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID644830284 
ProductYiaAB two helix domain protein 
Protein accessionYP_002981465 
Protein GI241663105 
COG category[S] Function unknown 
COG ID[COG4682] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.679887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.782208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATT CCTATCAAGC GCACCGACCC TCTTTTGCCT TTGTCGCAGC TTCCTGGGCG 
GCGCTACTGG CCGGCTTTCT TGCGTTTCTT GTTGGACTCT TCAATGCCAA CATGCAGTTG
AATGAGCGGG GCTACTACTT CACCGTGCTC GTCTACGGCC TCTTCGCCGC TGTGTCGGTA
CAAAAGAGCG TGCGAGACCG GCTCGAAGGT ATCCCCGTCA CGGGTATCTA CTACGGCCTG
AGCTGGGTTT CCGTGCTTCT GGCTGTGCTG CTCCTGTGTG TAGGTCTGTT CAATGCCACG
CTTGCCCTGA GCGAAAAGGG TTTCTACGGC ATGTCGTTTG CCCTTGCACT GTTCGGCGCC
ATTGCCGTGC AAAAGAACAC GCGCGATATC CAGGCAGCCC GACCACTCGT CATTGATCCG
GCCCTGGTAC AGCACGTTCC GGATGCCAGC GCATTCGCCC GCCAAGACGA CTAG
 
Protein sequence
MQNSYQAHRP SFAFVAASWA ALLAGFLAFL VGLFNANMQL NERGYYFTVL VYGLFAAVSV 
QKSVRDRLEG IPVTGIYYGL SWVSVLLAVL LLCVGLFNAT LALSEKGFYG MSFALALFGA
IAVQKNTRDI QAARPLVIDP ALVQHVPDAS AFARQDD