Gene Rpic12D_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1498 
Symbol 
ID8019143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1583579 
End bp1583965 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content62% 
IMG OID644830276 
Productmethionine sulfoxide reductase B 
Protein accessionYP_002981457 
Protein GI241663097 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0060677 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA AGAAATCCGA CGCCGAATGG CGCGACCAAC TCTCCGACAT CGAATACCGT 
GTCACCCGCG AAGCGGCCAC TGAGCGCCCC TTCACCGGCA AGTACTGGGA CCACTGGGAG
CGTGGCGTCT ACAACTGCGT GTGCTGCGGC ACGCCGCTGT TTGAATCGTC GACCAAGTTC
GATGCGGGCT GCGGCTGGCC GAGCTATTTC CAGCCCATCA ACGGCGAGGT GATCGACGAG
AAGACGGACC GCTCGCACGG CATGCTGCGC ATCGAAGTGC AGTGCAAGAA TTGTGGCGCG
CACCTCGGCC ACGTGTTCGA GGATGGCCCC GCGCCCACTG GGCTGCGGTA TTGCATCAAC
TCGGCTGCGC TAAAATTCGG CGATTGA
 
Protein sequence
MTVKKSDAEW RDQLSDIEYR VTREAATERP FTGKYWDHWE RGVYNCVCCG TPLFESSTKF 
DAGCGWPSYF QPINGEVIDE KTDRSHGMLR IEVQCKNCGA HLGHVFEDGP APTGLRYCIN
SAALKFGD