Gene Rpic12D_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1497 
Symbol 
ID8019142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1581861 
End bp1583450 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content65% 
IMG OID644830275 
Producthypothetical protein 
Protein accessionYP_002981456 
Protein GI241663096 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0834231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCT CCCCCGCCGC CTTGCCTGAC GATTCCCTTG CGAGCCCCTT CGACTGGCCT 
GGCCGCCCCG CAGCAGCCCC CGGTTTCTCG GCACTGGGCG AACGCTTTCT TACACGCCTG
CCCCCGATGC CCATGCCTGC GGGAGCGATT GGCGAACCGT ATCTGGTCGG GTTCTCGCCA
GACGCCGCAG CGTCGCTCGG CATCTCGCGC GCCGAACTCG ACACCGCTGC GGGGCTGGCC
GTATTCACCG GTAACGCCGT CGCCACCTGG AGCGACCCGC TCGCCACTGT CTATTCAGGC
CACCAGTTCG GCGTGTGGGC AGGCCAGTTG GGCGATGGCC GTGCGCTGCT GCTGGCGGAA
TTCCAGACCG CCGACGGCCC CTACGAAGTC CAGCTCAAAG GTGCCGGCCG TACGCCGTAT
TCGCGCATGG GCGACGGGCG CGCCGTGCTG CGATCGTCCA TTCGGGAATT CCTCTGCTCG
GAAGCCATGG CAGGCCTCGG CATTCCGACC ACGCGCGCCC TGTGCGTGAC CGGCGCTGAC
GCCCCCGTGC GCCGCGAAGA GATCGAAACC GCCGCTGTTG TTACGCGCCT CGCAACGTCC
TTCGTGCGCT TCGGTCATTT CGAACACTTC GCGGCCAGCG AACAGCTGCC CCAGCTTCGT
GCACTCGCCG ATTACGTCAT CGACCGCTTC TACCCCGCCA GCCGCAGCGA GCCGCAACCG
TATCTCGCCC TGCTGCGCGA AATTGCCCGC CGCACCGCTG AACTGATGGC CGACTGGCAG
GCCGTTGGCT TCTGCCACGG CGTGATGAAC ACGGACAACA TGTCGATCCT CGGCCTCACG
CTTGATTACG GCCCGTTCGG CTTCCTGGAC GGCTTTGACG CCAACCACAT CTGCAACCAC
TCTGACAGCG GCGGCCGTTA CGCCTACGCC CAGCAGCCGC AGATCGGCTA CTGGAACCTG
TTCTGCCTCG CGCAGGCGTT GCTGCCGCTG TTTGGCGAAG ATCCCCACGT TTTCGTCAAT
TTGAGCGACG AAGCGCAGGC TCAACCCGCC ATCGATGCCG CGCAAAACGT ATTGCTGACC
TACCGCGACG TCTACGGCGC GGCGTTCTAC GCACGTTATC GCGCCAAGCT CGGCCTCTCC
ACTGCACAGG ACGCAGACGA GGCGCTCTTC GGCGATCTGT TCAAGCTCCT GCACAACCAG
CGTGCCGATT ACACGTTGTT CTTCCGCCAC CTCGCCGACG TACGCCGCGA CGACACGCCG
GCTGCGGCAG AAGCGCGCAC CGTGCGCGAT TTCTTCTTCG ACCGTGCAGC CGCAGACGTA
TGGCTTGCCG CTTATCGGCA GCGCTTGCAG GCCGAACCGC AATCCGACGA CGAACGCGCA
GCCGCCATGC AGCGCGTCAA CCCGAAATAC GTGCTGCGTA ACCACCTAGC TGAAATCGCC
ATCCGCCGCG CCAAGGAAAA GGATTTCTCC GAAGTCGAAA ACCTGCGCGC CGTGCTGGCC
CGCCCGTTTG ACGACCACCC CGGCTTCGAG CACTACGCGC AGCCCGCGCC GGACTGGGCA
TCGTCATTGG AAGTGAGCTG CTCGTCGTGA
 
Protein sequence
MTASPAALPD DSLASPFDWP GRPAAAPGFS ALGERFLTRL PPMPMPAGAI GEPYLVGFSP 
DAAASLGISR AELDTAAGLA VFTGNAVATW SDPLATVYSG HQFGVWAGQL GDGRALLLAE
FQTADGPYEV QLKGAGRTPY SRMGDGRAVL RSSIREFLCS EAMAGLGIPT TRALCVTGAD
APVRREEIET AAVVTRLATS FVRFGHFEHF AASEQLPQLR ALADYVIDRF YPASRSEPQP
YLALLREIAR RTAELMADWQ AVGFCHGVMN TDNMSILGLT LDYGPFGFLD GFDANHICNH
SDSGGRYAYA QQPQIGYWNL FCLAQALLPL FGEDPHVFVN LSDEAQAQPA IDAAQNVLLT
YRDVYGAAFY ARYRAKLGLS TAQDADEALF GDLFKLLHNQ RADYTLFFRH LADVRRDDTP
AAAEARTVRD FFFDRAAADV WLAAYRQRLQ AEPQSDDERA AAMQRVNPKY VLRNHLAEIA
IRRAKEKDFS EVENLRAVLA RPFDDHPGFE HYAQPAPDWA SSLEVSCSS