Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1497 |
Symbol | |
ID | 8019142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1581861 |
End bp | 1583450 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830275 |
Product | hypothetical protein |
Protein accession | YP_002981456 |
Protein GI | 241663096 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0834231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCCT CCCCCGCCGC CTTGCCTGAC GATTCCCTTG CGAGCCCCTT CGACTGGCCT GGCCGCCCCG CAGCAGCCCC CGGTTTCTCG GCACTGGGCG AACGCTTTCT TACACGCCTG CCCCCGATGC CCATGCCTGC GGGAGCGATT GGCGAACCGT ATCTGGTCGG GTTCTCGCCA GACGCCGCAG CGTCGCTCGG CATCTCGCGC GCCGAACTCG ACACCGCTGC GGGGCTGGCC GTATTCACCG GTAACGCCGT CGCCACCTGG AGCGACCCGC TCGCCACTGT CTATTCAGGC CACCAGTTCG GCGTGTGGGC AGGCCAGTTG GGCGATGGCC GTGCGCTGCT GCTGGCGGAA TTCCAGACCG CCGACGGCCC CTACGAAGTC CAGCTCAAAG GTGCCGGCCG TACGCCGTAT TCGCGCATGG GCGACGGGCG CGCCGTGCTG CGATCGTCCA TTCGGGAATT CCTCTGCTCG GAAGCCATGG CAGGCCTCGG CATTCCGACC ACGCGCGCCC TGTGCGTGAC CGGCGCTGAC GCCCCCGTGC GCCGCGAAGA GATCGAAACC GCCGCTGTTG TTACGCGCCT CGCAACGTCC TTCGTGCGCT TCGGTCATTT CGAACACTTC GCGGCCAGCG AACAGCTGCC CCAGCTTCGT GCACTCGCCG ATTACGTCAT CGACCGCTTC TACCCCGCCA GCCGCAGCGA GCCGCAACCG TATCTCGCCC TGCTGCGCGA AATTGCCCGC CGCACCGCTG AACTGATGGC CGACTGGCAG GCCGTTGGCT TCTGCCACGG CGTGATGAAC ACGGACAACA TGTCGATCCT CGGCCTCACG CTTGATTACG GCCCGTTCGG CTTCCTGGAC GGCTTTGACG CCAACCACAT CTGCAACCAC TCTGACAGCG GCGGCCGTTA CGCCTACGCC CAGCAGCCGC AGATCGGCTA CTGGAACCTG TTCTGCCTCG CGCAGGCGTT GCTGCCGCTG TTTGGCGAAG ATCCCCACGT TTTCGTCAAT TTGAGCGACG AAGCGCAGGC TCAACCCGCC ATCGATGCCG CGCAAAACGT ATTGCTGACC TACCGCGACG TCTACGGCGC GGCGTTCTAC GCACGTTATC GCGCCAAGCT CGGCCTCTCC ACTGCACAGG ACGCAGACGA GGCGCTCTTC GGCGATCTGT TCAAGCTCCT GCACAACCAG CGTGCCGATT ACACGTTGTT CTTCCGCCAC CTCGCCGACG TACGCCGCGA CGACACGCCG GCTGCGGCAG AAGCGCGCAC CGTGCGCGAT TTCTTCTTCG ACCGTGCAGC CGCAGACGTA TGGCTTGCCG CTTATCGGCA GCGCTTGCAG GCCGAACCGC AATCCGACGA CGAACGCGCA GCCGCCATGC AGCGCGTCAA CCCGAAATAC GTGCTGCGTA ACCACCTAGC TGAAATCGCC ATCCGCCGCG CCAAGGAAAA GGATTTCTCC GAAGTCGAAA ACCTGCGCGC CGTGCTGGCC CGCCCGTTTG ACGACCACCC CGGCTTCGAG CACTACGCGC AGCCCGCGCC GGACTGGGCA TCGTCATTGG AAGTGAGCTG CTCGTCGTGA
|
Protein sequence | MTASPAALPD DSLASPFDWP GRPAAAPGFS ALGERFLTRL PPMPMPAGAI GEPYLVGFSP DAAASLGISR AELDTAAGLA VFTGNAVATW SDPLATVYSG HQFGVWAGQL GDGRALLLAE FQTADGPYEV QLKGAGRTPY SRMGDGRAVL RSSIREFLCS EAMAGLGIPT TRALCVTGAD APVRREEIET AAVVTRLATS FVRFGHFEHF AASEQLPQLR ALADYVIDRF YPASRSEPQP YLALLREIAR RTAELMADWQ AVGFCHGVMN TDNMSILGLT LDYGPFGFLD GFDANHICNH SDSGGRYAYA QQPQIGYWNL FCLAQALLPL FGEDPHVFVN LSDEAQAQPA IDAAQNVLLT YRDVYGAAFY ARYRAKLGLS TAQDADEALF GDLFKLLHNQ RADYTLFFRH LADVRRDDTP AAAEARTVRD FFFDRAAADV WLAAYRQRLQ AEPQSDDERA AAMQRVNPKY VLRNHLAEIA IRRAKEKDFS EVENLRAVLA RPFDDHPGFE HYAQPAPDWA SSLEVSCSS
|
| |