| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1490 |
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| Symbol | |
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| ID | 8019135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1572906 |
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| End bp | 1574429 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644830268 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_002981449 |
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| Protein GI | 241663089 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0819363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.294594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACAC CCATCACCCC CACCGGCCTC GAAGCCCAAT CCGAACTGCG CCGACGCCTG
CGCTCGCGCC ACCTGATGAT GATCGCCCTG GGCGGCGCCA TCGGCACGGG GCTCTTCGTT
GCGTCCGGCG CGTCCATTGC GCAGGCTGGC CCCGGCGGCG CACTGCTGAC CTATACGCTG
ATCGGCGTGA TGGTCTATTG CCTGATGACG AGTCTTGGCG AGCTGGCGGT GCATCTGCCG
GTCTCGGGCT CGTTCGTGAC TTATAGCCGT TTGTATGTGG AAGAAGGCTT CGGCTTTGCG
CTGGGGTGGA ACTACTGGTT TGCGCTGGCC GTGTCCGTTG CCGTGGAACT GGCCGCCGCG
CAACTCGTGA TGAAGTACTG GTTCCCGGGC GTGTCGGGCA TGGTGTGGAG CGCTGCGTTC
CTGCTGCTGA TGTTTGGCCT CAACGCCTTT TCCGTGCGTG GCTTTGGCGA GGCGGAATAC
TGGTTCTCGA TGGTCAAGGT GGTGACCATC GTCGTGTTCC TGCTGATCGG CCTCGCGATG
ATCTTCGGCA TCATGCATGG CGGCCCACAG TCGGGTTGGC AGAACTTCAC CGTGGGTGAT
GCGCCGTTCG TGGGCGGGGT GCCTGCCATG GTTGGTGTGG CGATGATTGC GGGATTCTCG
TTCCAGGGTG TCGAGACCAT CGGCGTGGCC GCCGGCGAGG CGGAGAACCC CTCACGCACG
ATCCCGCGCG CCATCCGCCA GACGTTCTGG CGCATTCTGC TGTTCTACGT GCTGGCGATC
CTGATCATCG GCGTGCTGCT GCCATACACC GACCCGAACC TGCTGCGCAA TGAAGCGACG
GACGTCGGCG TCAGTCCGTT CGCACTGGTG TTCCAGCACG CGGGCCTCGC GTTTGCGGCC
GGGATGATGA ATGCGGTGGT GCTGACCGCG CTGCTGTCGT CCGGCACGTC GAGCCTCTAT
GTGTCGACGC GGATTCTGTA CGATTTGGCG CTCGAAGGCC AAGCGCCGCG CTGGTTTGCC
AAGGTGTCTG CCAATGGCGT GCCGCATCGC GCGCTGCTCG CCACGTCCGC TGTTGGCGCG
TTGTGCTTCT TCAGCTCTTT GTTTGGCGAT CAGGTGGTCT ACCTGTGGCT GCTGAATACG
TCTGCGGTAA CGTGCTTCAT TGCCTGGTTC GGCATTGCGC TGGCGCACTA CCGATTTCGC
AAGGGATTCA CGAGCCAGGG CCACTCAGTG GAGCAACTGG CGTATCGGTC GCCGTTCTTC
CCATTCGGGC CGATCATGGT GGCGATCCTG TGCGCGGTGA TCATCCTTGG GCAGAACACC
AAGGCACTGT TTGCACCGGT GGACAACTTC GGCGCCTTCA TCGCAACGTA TTGCGGCGTG
ATCCTGTTCG TGGCGATCTG GCTGGCTTAC CGCTGGAAAT TCAAGACGCG ATTCGTGAAG
TACACCGAGA TGCAGTTCAG CCCGGCGCAT CTGCAACAAC CCGAACCTAC AAACGTCACT
GCGACGGGCG TGGTTGCCAA CTAG
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| Protein sequence | MHTPITPTGL EAQSELRRRL RSRHLMMIAL GGAIGTGLFV ASGASIAQAG PGGALLTYTL
IGVMVYCLMT SLGELAVHLP VSGSFVTYSR LYVEEGFGFA LGWNYWFALA VSVAVELAAA
QLVMKYWFPG VSGMVWSAAF LLLMFGLNAF SVRGFGEAEY WFSMVKVVTI VVFLLIGLAM
IFGIMHGGPQ SGWQNFTVGD APFVGGVPAM VGVAMIAGFS FQGVETIGVA AGEAENPSRT
IPRAIRQTFW RILLFYVLAI LIIGVLLPYT DPNLLRNEAT DVGVSPFALV FQHAGLAFAA
GMMNAVVLTA LLSSGTSSLY VSTRILYDLA LEGQAPRWFA KVSANGVPHR ALLATSAVGA
LCFFSSLFGD QVVYLWLLNT SAVTCFIAWF GIALAHYRFR KGFTSQGHSV EQLAYRSPFF
PFGPIMVAIL CAVIILGQNT KALFAPVDNF GAFIATYCGV ILFVAIWLAY RWKFKTRFVK
YTEMQFSPAH LQQPEPTNVT ATGVVAN
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