Gene Rpic12D_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1486 
Symbol 
ID8019131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1566932 
End bp1568110 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content65% 
IMG OID644830264 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_002981445 
Protein GI241663085 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.250255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0145622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG CAGTCATCGT TTCCACCGCA CGTACCGGCC TGGCCAAAAG CTGGAAGGGC 
GCCTTCAACA TGACGCACGG CGCCACGCTG GGCGGCCACG CGGTTCAGCA CGCCATCGAG
CGCGCCAAGA TCGAGCCGGG CGAAGTGGAA GACATCCTGA TGGGCTGTGC GAACCCAGAA
GGCGCAACGG GCGCCAACAT CGCTCGCCAG ATCGCCCTGC GCGCAGGCTG CCCCGTGACC
GTGCCGGGCG CGACCGTCAA CCGCTTCTGC TCGTCGGGCC TGCAGACCAT CGCCATGGCG
GCGCAGCGCG TGATTGCCGA TGAAGGCGAC ATCTTCGTGG CTGGCGGCGT GGAATCCATC
TCGTGCGTGC AGCAGGAAAT GAACCGCCAC ATGATGACCG AAGGCTGGCT CAACAAGCAC
AAGCCGGAAA TCTACTGGAA CATGCTCCAG ACCGCCGAGA ACGTCGCCAA GCGCTACAAC
ATCGCCAAGG AGCGCATGGA CGAGTACGGC GTGCAAAGCC AGCAGCGCGC CGCCGCCGCT
GCTGCTGCCG GAAAGTTCAA CGACGAGATC GTCCCGATGA CGACGGTGAT GGGCGTGGCT
GATGCCAAGA CCGGCCAGCT CATGACCCGC GAAGTCACGA TCGCCGCCGA CGAAGGGATT
CGCCCCGACA CGACGCTTGA AGGCGTGGCA AAAATTCGCT CCGCCGTGCC GGGTGGCGTG
GTCACTGCTG GCAATGCCAG CCAGTTCTCC GACGGCGCAT CCGCCGCTGT GGTGATGAAT
GGCAAGGTGG CAGCCGCCAA GGGCTTGCAG CCGCTGGGCG TGTTCCGCGG CTTTGCCGTG
GCCGGCTGCG AGCCGGACGA AATGGGCATC GGCCCCGTCT TTGCTGTGCC CAAGCTGCTG
AAGAAGGCCG GTCTCAAGGT TGAAGACATT GGCCTGTGGG AACTGAACGA AGCGTTTGCC
GTGCAGGTGC TGTACTGCGC TGACAAGCTG GGCATTCCGA TGGACCGCCT GAACGTCAAC
GGCGGCGCCA TCGCCGTGGG CCACCCGTAT GGCGTGTCGG GCGCACGCCT GGTCGGCCAC
GCACTGATCG AAGGCAAGCG CCGCGGCGTC AAGTACGTGG TGGTAACCAT GTGCATCGGC
GGCGGCCAAG GCGCAGCCGG CCTGTTCGAG GTGCTCTAA
 
Protein sequence
MTEAVIVSTA RTGLAKSWKG AFNMTHGATL GGHAVQHAIE RAKIEPGEVE DILMGCANPE 
GATGANIARQ IALRAGCPVT VPGATVNRFC SSGLQTIAMA AQRVIADEGD IFVAGGVESI
SCVQQEMNRH MMTEGWLNKH KPEIYWNMLQ TAENVAKRYN IAKERMDEYG VQSQQRAAAA
AAAGKFNDEI VPMTTVMGVA DAKTGQLMTR EVTIAADEGI RPDTTLEGVA KIRSAVPGGV
VTAGNASQFS DGASAAVVMN GKVAAAKGLQ PLGVFRGFAV AGCEPDEMGI GPVFAVPKLL
KKAGLKVEDI GLWELNEAFA VQVLYCADKL GIPMDRLNVN GGAIAVGHPY GVSGARLVGH
ALIEGKRRGV KYVVVTMCIG GGQGAAGLFE VL