Gene Rpic12D_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1481 
Symbol 
ID8019126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1560925 
End bp1561935 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID644830259 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_002981440 
Protein GI241663080 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0634045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0233032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGA CCTATCAGCG CATCGTTCTG GCTTCGCGCC CGCAAGGGGC CGTGACGCCC 
GACAATTTCC GCCTGGAGAC GGTGGAGCTT CCCGAGCTGC AGGAGGGCCA GGTGCTGGTG
CGCAACCATT TCCTGTCGCT CGATCCGTAC ATGCGCGGCC GCATGAACGA CAGCAAGTCC
TATGCGCAGC CGCAGCCGCT GGATGAGGTG ATGATCGGCG GCACGGTGGG CGTGGTGGAA
GCGTCCAAGA ACCCGTCGTT TGCCGTGGGC GATGCCGTTG TCGGCATGTT CGGCTGGCAA
GAAGTGGGCG TGTCGGACGG CCGCGGCATT CAGAAGGTCG ATACGCGCCA CATTCCGCTT
TCGGCGTATC TCGGTTCGGT CGGTATGCCG GGCGTGACGG CGTGGTATGG CCTGAACAAG
ATCATGCTGC CGAAGCCCGG CCAGACCGTG GCCGTGAGCG CCGCTTCGGG CGCGGTGGGC
AGCGTGGTCG GCCAGCTTGC CAAGCTCAAG GGCTGCCGCG TGGTGGGCTT TGCCGGTGGC
AAGGACAAGT GCGATTACGT GGTCAACGAA CTGGGCTTTG ACGCCTGCAT CGACTACAAG
GCCGCCAGTG ACGCAAAAGA GCTGTACAAG ATGCTCAAGG AAGCGACGCC CGACGGCATC
GATTCGTACT TTGAGAACGT CGGTGGCGCG ATTCTGGATG CGGTGCTCTC GCGCATGAAC
GCGTTCGGCC GCATTGCCAT GTGCGGCATG ATCGCCGGCT ACGACGGTCA GCCGCTGCCG
CTGCAGAACC CGCAGTTGAT CCTGGTGTCG CGTCTGACCA TCGAGGGCTT CATCGTCTCT
GAACACATGG ACGTGTGGCC GGAAGCACTG CGCGAGCTGG GCGGCTTCGT GGCCCAGGGC
AAGCTGAAGT TCCGCGAGAG CGTGGCACAG GGCTTGGCTA GCGCACCGGA AGCGTTCATG
GGCCTGCTGA AGGGGAAGAA CTTCGGCAAG CAACTCGTCA AGCTGGTTTG A
 
Protein sequence
MSKTYQRIVL ASRPQGAVTP DNFRLETVEL PELQEGQVLV RNHFLSLDPY MRGRMNDSKS 
YAQPQPLDEV MIGGTVGVVE ASKNPSFAVG DAVVGMFGWQ EVGVSDGRGI QKVDTRHIPL
SAYLGSVGMP GVTAWYGLNK IMLPKPGQTV AVSAASGAVG SVVGQLAKLK GCRVVGFAGG
KDKCDYVVNE LGFDACIDYK AASDAKELYK MLKEATPDGI DSYFENVGGA ILDAVLSRMN
AFGRIAMCGM IAGYDGQPLP LQNPQLILVS RLTIEGFIVS EHMDVWPEAL RELGGFVAQG
KLKFRESVAQ GLASAPEAFM GLLKGKNFGK QLVKLV