Gene Rpic12D_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1458 
Symbol 
ID8019103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1540151 
End bp1541002 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content66% 
IMG OID644830236 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002981417 
Protein GI241663057 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0245502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG TCACCCGATC CACCTTGCCT GACGATGCGG TGTTGCCCGC TCGGTGGCGG 
GTGGCGTTGC TGGCACCGGC CGTCGCGCTG TTCTGCGCGT TCTGGCTGCT GCCGATGGCC
GCGTTGCTGC GTGTGAGCGG CAGCGAAGGG CTGGTCGCCA CGTACACGGC TGCACTCACC
ACGTCGCGCT ATCTGGGCAG CCTGTTCTCG ACGGTGGTGC TGTCGGCGGC GGTCACGCTG
GCGACGCTTG TCCTCTCGAC CATCGCCGGG CTGTTTCTGG TGCGTCGCAA CGTGCCGGGT
AAGCGGATGA TTACCGCCAT GCTGACGTTT CCGCTGGCGT TTCCCGGCGT GGTGGTCGGC
TTCATGGTGA TCCTGCTGGC GGGGCGCCAG GGACTGCTGG GCGACGTCAC GCACAAGCTC
ATCGGCGAGA AATGGGTGTT CGCCTATTCC ATCGGCGGGT TGTTTCTCGG CTACCTGTAT
TTCTCGATTC CGCGCGTGGT GCTGACGGTG ATGGCTGCGG CGGAAAAGCT CGATCGCTCA
CTGGAAGAAG CGGCGCGCTC GCTGGGCGCA TCGTCGTGGC AGGTCACGCG CGATGTGCTG
GTGCCGGGGC TGGCGCCCGC GCTGATCGCC TCGGGGGCGA TCTGTTTTGC CACGTCGATG
GGCGCATTCG GCACCGCCTT CACGCTCGCC ACCGACATCG ACGTGTTGCC GATGACGATC
TATACCGAGT TCACGCTCAA CGCGGGCATT GCGATGGCGG CAGCGCTGTC GGTGGTGCTG
GGCGTGGTGA CGTGGCTGGT GCTGGCGATT GCCCGCACCG CGAGTGGTAG CCCAAGTGGG
GCCGCAGCAT GA
 
Protein sequence
MSTVTRSTLP DDAVLPARWR VALLAPAVAL FCAFWLLPMA ALLRVSGSEG LVATYTAALT 
TSRYLGSLFS TVVLSAAVTL ATLVLSTIAG LFLVRRNVPG KRMITAMLTF PLAFPGVVVG
FMVILLAGRQ GLLGDVTHKL IGEKWVFAYS IGGLFLGYLY FSIPRVVLTV MAAAEKLDRS
LEEAARSLGA SSWQVTRDVL VPGLAPALIA SGAICFATSM GAFGTAFTLA TDIDVLPMTI
YTEFTLNAGI AMAAALSVVL GVVTWLVLAI ARTASGSPSG AAA