| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1443 |
|---|
| Symbol | |
|---|
| ID | 8019088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1522633 |
|---|
| End bp | 1523532 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644830221 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002981402 |
|---|
| Protein GI | 241663042 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.181358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.808865 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTCG ACCTGGAATC GCTGCAGGTA TTGGTCTCGG TAATCGAGGA AGGCAGCCTG
GCGGCGGCTT CCGAGCGGCA GCACATCGTG CCTTCGGCCA TCAGCCGACG CATTGCGGAG
CTGGAAAGCG ACGCCGGCAC CGCCCTGCTC TATCGGCACA GCCGTGGCGT GGAGCCCACC
CCGGCGGGCT CGGCGTTGTA CTACCGGGCC AAGCGCCTGA TCGATCAGAT GCAGGAAATC
TCGTCGGAAA TGAGCGAGTA CGCCCAGGGC GTGCGGGGGC ACGTGCGCAT GCACGTCAAC
TTTTCGACCA TGGTCCAGTA CCTGCCGGGC GACCTGTCCT CGTTCCTGTC GATCAACCCC
GACGTGAAGA TCGACCTGAT GGAGAAAAGC AGCAGCCAGG TCCTGCGCTC GGTCGAAGCG
GGCACCGCTG ACATCGGCAT CTGCAGCCAG CCGGAAGCTG CACCGGGGCT GGAAGTACGG
CCGTATCACG TTGATAGGCT CGTGCTGATC GTGCCGCACG ACCACCCGAT CGGCGCGGCG
CGCCACCTGC GCTTTGCCGA TACCCTGGAC TATGACTACG TGAGCATGCC GCTGGGCGCG
TCAATCTCCA CGCTCTGCGC GCAGAGCGCC GAGCAGGCCG GCAAGCAGCA CAAGATCCGC
ATCCAGGTGA CCAGCTTCGA GGGGCTGCGC AACATGGTGG CGGCAGGCCT TGGCATCGGC
CTGCTGCCCA AGGCCAGTGT CAAGCCCTAT CTGCGCAACA GCACGCTGCG CATGGTCGAG
CTGGATGAGA CGTGGGCACA GCGCCCGCTG TCCGTCATCA CGCGGGGCTA CGCGGCGCTG
CCGGTGCCGG CCCGGCTGCT GATCGACCAT CTGGTATCCC AGGCCAGCGC AGAAAACTAG
|
|---|
| Protein sequence | MRFDLESLQV LVSVIEEGSL AAASERQHIV PSAISRRIAE LESDAGTALL YRHSRGVEPT
PAGSALYYRA KRLIDQMQEI SSEMSEYAQG VRGHVRMHVN FSTMVQYLPG DLSSFLSINP
DVKIDLMEKS SSQVLRSVEA GTADIGICSQ PEAAPGLEVR PYHVDRLVLI VPHDHPIGAA
RHLRFADTLD YDYVSMPLGA SISTLCAQSA EQAGKQHKIR IQVTSFEGLR NMVAAGLGIG
LLPKASVKPY LRNSTLRMVE LDETWAQRPL SVITRGYAAL PVPARLLIDH LVSQASAEN
|
|---|
| |