Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1431 |
Symbol | benD |
ID | 8019076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1513114 |
End bp | 1513896 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644830210 |
Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
Protein accession | YP_002981391 |
Protein GI | 241663031 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.780852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.326408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC AACGATTTTC AGGCAAGGCC GTCGTGGTGA CGGGCGCAGC GCAGGGCATC GGCCGTGGCG TGGCGGTGGC TGCGGCAGAA GAGGGGGCGC ACGTGCTGCT GGTGGACCGC GCCGAACTCG TCCACGAAGT GCAGGCCGAG ATTGCGGCAG CGGGCGGCCA CGCCCACGCC ACCACGGCTG ATCTCGAAAC CTACGCCGGT GCCCAGCATG CCGTGCAGAC TGCGCTTGGC GCGTTCGGCC GCATCGACGT GCTCATCAAC AACGTCGGCG GCACCATCTG GGCCAAGCCG TATCAGCACT ATGAAGAGGC GCAGATCGAG GCGGAGATCC GCCGTTCACT GTTTCCGACG CTGTGGTGCT GCCGCGCGGT GCTGCCGCAC ATGGTCGAGC GCAAGCAGGG CGTGATCGTG AACGTGTCGT CCATTGCTAC ACGCGGCATC TACCGGATTC CGTACTCGGC GGCCAAGGGC GGCGTCAATG CGCTCACCGC GAGTCTGGCG TTGGAACATG CGGACGACAA CATCCGCGTC AACGCCGTCG CTACGGGCGG CACGGAGGCA CCGCCGCGGA AGATCCCGCG CAACACGGCG CCCATGTCGG AGCAGGAAAC CGTCTGGTAC CAGGGCATCG TCGACCAGAC CCTCGCCAGC AGCCTGATGC ACCGCTACGG CACGATCGAC GAGCAGGTGC GGGCGATCCT GTTCCTCGCG TCAGATGAGG CCTCGTACAT CACCGGGACG GTACTGCCCG TCGGCGGCGG AGACCTGGGT TGA
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Protein sequence | MSTQRFSGKA VVVTGAAQGI GRGVAVAAAE EGAHVLLVDR AELVHEVQAE IAAAGGHAHA TTADLETYAG AQHAVQTALG AFGRIDVLIN NVGGTIWAKP YQHYEEAQIE AEIRRSLFPT LWCCRAVLPH MVERKQGVIV NVSSIATRGI YRIPYSAAKG GVNALTASLA LEHADDNIRV NAVATGGTEA PPRKIPRNTA PMSEQETVWY QGIVDQTLAS SLMHRYGTID EQVRAILFLA SDEASYITGT VLPVGGGDLG
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