Gene Rpic12D_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1430 
Symbol 
ID8019075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1512089 
End bp1513117 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content63% 
IMG OID644830209 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_002981390 
Protein GI241663030 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0543245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.324451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTT TCACAGTCGC ATTGAACTTC GAAGACGGCG TGACCCGCTT CATCGATTGC 
AAAGCGGGGG AGAAGGTGCT CGATGCCGCC TTCCGCGCCA AGATCAACCT GCCCATGGAT
TGCTCCGATG GCGTCTGCGG GACCTGCAAG TGCCGCGCCG AGAGCGGAAC CTACGACCTT
GGCGACGATT ACATTGAAGA CGCCCTGACC GAAGACGAGA AGAACACCGG CCTTGTGCTG
ACGTGCCAGA TGGTGCCGCA AAGCGATTGC GTGATCGCGG TGCCGACCTC GTCGACCGCC
TGCAAAACGG GGCAGAGCAC GTTCGGCGCA ACGGTGTCGA ACGTCGAGTT GCACAACGAT
GCCGCCGTGG TGCTCGAGCT GGACGTGGAT GCTACGGCGC CGGTGTTCCT GCCCGGCCAG
TACGTCAACA TCGGTGTGCC GGGAAGCGGC CAGCACCGCT CGTATTCGTT CTCCTCAGCG
CCCGGTGAAA CGAAGATCAG CTTTCTGATC AAGAAGATTC CCGGCGGCGT GATGAGCACC
TGGCTCGAAG CCGCAAAGCC GGGCGACAAG CTCGATCTGC AGGGGCCGCT GGGCAGCTTC
TACCTGCGTG ATGTGCAGCG GCCGCTGTTG TTCCTGGCCG GCGGCACCGG CCTTGCGCCG
TTCCTGTCGA TGCTCGAAGT GCTGGCGCGC AGCAACTCGC AGCAGCCCGT GCATCTGATC
TACGGCGTGA CCCGTGATCT CGACCTGGTA CAGGTCGACG CGATCGATGC CTATGTGGCG
CGGTTGCCGA ACTTCAGCTA CGCCACCGTC GTCGCCGACG CCGCGTCGAA TCATCCGCGC
AAGGGTTGGG TGACGCAGCA CATTCCGGCC AACGCGCTGA ACGATGGCGA CGTGGATGCC
TACCTGTGCG GGCCGCCGCC GATGGTAGAC GCCGTGCGCA AGTACTTTGA CGACCAAGGC
GTGAAACCCA AGAGCTTCCA CTACGAGAAG TTCACGCCCA ATGCAGTACC GGAGGCGAAG
GCGGCATGA
 
Protein sequence
MSSFTVALNF EDGVTRFIDC KAGEKVLDAA FRAKINLPMD CSDGVCGTCK CRAESGTYDL 
GDDYIEDALT EDEKNTGLVL TCQMVPQSDC VIAVPTSSTA CKTGQSTFGA TVSNVELHND
AAVVLELDVD ATAPVFLPGQ YVNIGVPGSG QHRSYSFSSA PGETKISFLI KKIPGGVMST
WLEAAKPGDK LDLQGPLGSF YLRDVQRPLL FLAGGTGLAP FLSMLEVLAR SNSQQPVHLI
YGVTRDLDLV QVDAIDAYVA RLPNFSYATV VADAASNHPR KGWVTQHIPA NALNDGDVDA
YLCGPPPMVD AVRKYFDDQG VKPKSFHYEK FTPNAVPEAK AA