| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1427 |
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| Symbol | |
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| ID | 8019072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1509235 |
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| End bp | 1510170 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830206 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_002981387 |
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| Protein GI | 241663027 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.322187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTGC GCGTATTCCA AACGAAAGAA GTGCAGGACC TGCTGAAGGC CGCTACCAAC
CTGGATGGCA ACGAAGGTAA CGCCCGCCTG AAGCAGATCA CCCACCGCTT GCTGGCGGAC
CTGTTCAAGG CCATCGACGA TCTCGACATC ACGCCGGATG AAGTCTGGGC CGGCATCAAT
TACCTGAACA AGCTTGGCCA GGACGGAGAG GCTGCATTGC TGGCTGCCGG CGTGGGCCTG
GAGAAGTATC TCGACATCCG CATGGACGCC GCCGACGAGG CGCTTGGTCT CAATGGCGGG
ACGCCGCGCA CGATCGAAGG CCCGCTGTAC GTGGCGGGCG CAACGGTGCG CGATGGCGTG
TCCCGCATCG ACGTGGATCC GGACCCCGCC GCAGGCCCGT TGATCATTCA CGGCACGGTA
ACCGGCCAGG ACGGCAAGCC GGTCGCCGGC GCCTTGGTCG AGTGCTGGCA TGCGAATTCG
AACGGTTTCT ACTCGCACTT TGACCCGACC GGCGAGCAGA GCCCGTTCAA CCTGCGCGGC
GCGGTCCGGA CCGGTGCCGA CGGCAAATAC GAATTCCGCA CGCTCATGCC CGTGGGCTAC
GGCTGCCCGC CAGAGGGTGC GACCCAGCAA CTGCTGAACG GACTGGCGCG CCACGGCAAC
CGGCCGGCGC ACGTGCACTT CTTCGTCACG AGCGACGGCC ACCGCAAGCT GACGACGCAA
TTCAACATCG AAGGCGATCC GCTGATCTGG GACGACTTCG CCTACGCCAC CCGTGAAGAA
CTGATTCCGC ACGTGGTGGA AAAAACCGGC GGCGGCGCGC TGGGCCTGAA AGCCGATGCG
TACAAGGACA TCGAATTCAA CTTCGTGCTC ACGCCGCTGG TTCAGGGCAA GGACAACCAG
CGCGTGAATC GCCTGCGCGC TTCGGCCGAG GCCTGA
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| Protein sequence | MNVRVFQTKE VQDLLKAATN LDGNEGNARL KQITHRLLAD LFKAIDDLDI TPDEVWAGIN
YLNKLGQDGE AALLAAGVGL EKYLDIRMDA ADEALGLNGG TPRTIEGPLY VAGATVRDGV
SRIDVDPDPA AGPLIIHGTV TGQDGKPVAG ALVECWHANS NGFYSHFDPT GEQSPFNLRG
AVRTGADGKY EFRTLMPVGY GCPPEGATQQ LLNGLARHGN RPAHVHFFVT SDGHRKLTTQ
FNIEGDPLIW DDFAYATREE LIPHVVEKTG GGALGLKADA YKDIEFNFVL TPLVQGKDNQ
RVNRLRASAE A
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