Gene Rpic12D_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1426 
Symbol 
ID8019071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1508909 
End bp1509199 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content62% 
IMG OID644830205 
Productmuconolactone delta-isomerase 
Protein accessionYP_002981386 
Protein GI241663026 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4829] Muconolactone delta-isomerase 
TIGRFAM ID[TIGR03221] muconolactone delta-isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.804783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.380314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTCC ACGTCCGCAT GGATGTCCGC CTGCCGGCCG ACATGCCCGC CGATGTCGCC 
AACGAGATCA AGGCGCGCGA AAAGGCCTAC TCGCAAGATC TGCAGCGCAG CGGCAAGTGG
CGCCACATCT GGCGCCTGGT TGGCGAGTAC GCGAACGTCA GCGTCTTCGA CGTGCAGAGC
AATGCTGAAC TGCACGACAT CCTGACGGCG CTGCCACTGT TTCCGTACAT GGAGATTTCC
GTGACACCGC TGTGCCGTCA TCCGTCGTCA GTTCACAGCG ACGACGCTTG A
 
Protein sequence
MLFHVRMDVR LPADMPADVA NEIKAREKAY SQDLQRSGKW RHIWRLVGEY ANVSVFDVQS 
NAELHDILTA LPLFPYMEIS VTPLCRHPSS VHSDDA