| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1425 |
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| Symbol | |
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| ID | 8019070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1507763 |
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| End bp | 1508872 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644830204 |
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| Product | muconate and chloromuconate cycloisomerase |
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| Protein accession | YP_002981385 |
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| Protein GI | 241663025 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.548292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.323436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCT CGATCGAGGC AATTCTAGTG GATGTGCCCA CCATCCGTCC GCACAAACTG
TCCGTCGCCA CCATGCACAC GCAGACGCTC GTCCTCGTGC GAGTGTGCTG CGAAGACGGC
ATCGAAGGCT GGGGCGAGGC CACCACCATT GGCGGCCTCA ACTACGGCGA AGAGAGCCCC
GAAAGCATCA AAGTCAACAT CGACACGCAC ATTGCGCCGC TGCTGATCGG CATGGAGGCG
CGCAATGTGG CGGCTGCCAT GGCACGCGTG CGCAAGACCA TCCAGGGCAA CCGCTTTGCC
AAGTGCGCGC TGGAAACGGC GCTGCTCGAT GCGCAGGCTC GCCGGCTCGG CGTGCCGCTG
TCGGAGCTGC TCGGCGGCCG GCTACGCGAT GCGCTGCCGG TGGCCTGGAC GCTCGCCAGT
GGCGACACGA AGAAGGACAT TGCCGAGGCA GAAGCGATGC TGGCTGAGCG CCGCCACCGC
ATCTTCAAGC TGAAGATCGG CTTGCGCCCG CTAGCAGACG ATGTGGCCCA TGTACTGGCC
ATCAAACGGG CGCTGGGCGA TGCCGTGAGC GTGCGCGTGG ACGTCAATCA GGCCTGGAGC
GAGCTCGACG CCGCCAATGG CATCGCCGCG TTGCAGGCCG GCGGCATCGA CCTGATCGAG
CAACCGGTGC GCGCAGAAAA CCGCGCCGCG CTGGAGCGCC TCGCCCGCCA GTTCGCCGTG
CCGATGATGG CCGATGAGGC ACTGCACGGT CCGCTCGATG CCTTCGAACT GGCGTGCAGC
GCGAGCGCCG ACGTCTTTGC CGTGAAGATC GCGCAGTCCG GCGGGTTGGT TCCGGCCATG
CAGGTCGCCG CCATCGCGCA GCTTGCGGGC ATCAGCCTCT ACGGCGGAAC GATGCTCGAA
GGGGCTGTCG GCACAGCAGC GTCGGCCCAC GTGTTTTCCA CCTTCGGCGA GCTGCAGTTC
GGCACCGAGC TGTTCGGCCC CTTGTTGCTC ACGCAAGAAC TGCTGACCGA GCCGCTGCAA
TACCGCGACT TCATGTTGCA GGTGCCGACC GGCCCCGGCC TGGGCATCGA GATCGATCGC
GACAAGCTGG CGCGCCTGCG CCGCCAATAA
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| Protein sequence | MIRSIEAILV DVPTIRPHKL SVATMHTQTL VLVRVCCEDG IEGWGEATTI GGLNYGEESP
ESIKVNIDTH IAPLLIGMEA RNVAAAMARV RKTIQGNRFA KCALETALLD AQARRLGVPL
SELLGGRLRD ALPVAWTLAS GDTKKDIAEA EAMLAERRHR IFKLKIGLRP LADDVAHVLA
IKRALGDAVS VRVDVNQAWS ELDAANGIAA LQAGGIDLIE QPVRAENRAA LERLARQFAV
PMMADEALHG PLDAFELACS ASADVFAVKI AQSGGLVPAM QVAAIAQLAG ISLYGGTMLE
GAVGTAASAH VFSTFGELQF GTELFGPLLL TQELLTEPLQ YRDFMLQVPT GPGLGIEIDR
DKLARLRRQ
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