Gene Rpic12D_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1416 
Symbol 
ID8019061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1496026 
End bp1496832 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content67% 
IMG OID644830195 
Productmolybdopterin dehydrogenase FAD-binding 
Protein accessionYP_002981376 
Protein GI241663016 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.208766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACT TCGAGTACCA GAAGGCCACC GACGCTCAGA CCGCCGTGAC CGCGCTGAAG 
ACGCACACCG ACGCCAAATA CCTCGGTGGC GGGCAAAGCC TGCTGGCAGC GATGAAGCTG
CGGTTGGCGC AGCCGTCAAC GCTGGTGGAT GTCACGCGCA TTCCGGGCAT GTCCGGCATT
CGCACGCAGC CCGGCGTGAT TACGGTGGGC GCAGCCACAC GCCATGCCGA TGTGGCAGAC
AGCGCTGACA TTGCCCGCAT GTTGCCCGCG CTGGGCGAAC TGGCCGGCGG CATCGGTGAC
AGGCAGGTGC GCGCGATGGG CACGCTCGGC GGGTCGCTTG CCAACAACGA CCCGGCGGCG
TGCTACCCGG CCGCGGTGCT GGGCCTGAAC GCCACCGTCG TCACCGAACG GCGCAACATC
GCGGCGGACG ATTTCTTCCT CGGCATGTAT GAGACCGCGC TGGCTGCGGA TGAACTCATC
ACCGAGGTGC AGTTTCCCGT GCCGGACCAG GCGGCCTACG TGAAATTCCG CAATCCGGCG
TCGCGCTTTG CGCTGGTGGG CGTGTTCATC AGCCGCAAGG GCAACAACGT GCGTGTGGCG
GTGACGGGCG CGGCGCCGTC CGTGTTCCGT TGCACGCCCC TGGAGCAGGC GCTGGCAGCC
AGCTTTACAT CGGAAGCCGC ACGCAAGGTG GTGGTGCCGG CCGACGATCT GGTGGGCGAT
CTGCATGCCT CGCCGGAATA CCGGGCGCAC CTCATTCCGG TATTGACGGC GCGCGCGGTC
GAACAGGCAT TGGCGCACCA CCATTGA
 
Protein sequence
MYDFEYQKAT DAQTAVTALK THTDAKYLGG GQSLLAAMKL RLAQPSTLVD VTRIPGMSGI 
RTQPGVITVG AATRHADVAD SADIARMLPA LGELAGGIGD RQVRAMGTLG GSLANNDPAA
CYPAAVLGLN ATVVTERRNI AADDFFLGMY ETALAADELI TEVQFPVPDQ AAYVKFRNPA
SRFALVGVFI SRKGNNVRVA VTGAAPSVFR CTPLEQALAA SFTSEAARKV VVPADDLVGD
LHASPEYRAH LIPVLTARAV EQALAHHH