Gene Rpic12D_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1409 
Symbol 
ID8019054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1489455 
End bp1489922 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content67% 
IMG OID644830188 
Producthypothetical protein 
Protein accessionYP_002981369 
Protein GI241663009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000519507 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.115817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCA TCATTGCCGC GCTCGCGTTG GTTGGTCTGC TGATCTACGG CGCGCTCCGG 
CTGTATGCGG GCGTTGCCGC GGCATACGGC GCGGTGGCGG GCGGCGCGGC GGTGCTGCTG
GCTGTGGCGC TGCTGGCCGG CGCAGTCGTT ACTTTCATCC GGCGTTATCG CGCCGTTCAT
GGCGTGAACG TGAAAGGCCA GCGAATTGTG TCGCTCAGTG CAAGCTGGGG GCAGGTCGCG
GTCGATGCCG AACAAAAGCG CGGGACGCTG CAGTTGCACG GGCAGGGCGC CCGTTTTCTC
TTTGCCGATA TTGTCGGCGC CGACGCGGTC GAGCGCGAGG GCGCCTGGAC GCTGGTGCTG
CGCCTGAAGC ATCAAACGCA GGCCGATTGG CTGATCCCGA TGCGCAACCG CCGGGAAGCG
CACCGCTGGG CGAAGATCTT CGCGCTGGCG GCGAGCCAGG AGCTTTGA
 
Protein sequence
MPFIIAALAL VGLLIYGALR LYAGVAAAYG AVAGGAAVLL AVALLAGAVV TFIRRYRAVH 
GVNVKGQRIV SLSASWGQVA VDAEQKRGTL QLHGQGARFL FADIVGADAV EREGAWTLVL
RLKHQTQADW LIPMRNRREA HRWAKIFALA ASQEL