| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1406 |
|---|
| Symbol | |
|---|
| ID | 8019051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1485051 |
|---|
| End bp | 1486277 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644830185 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002981366 |
|---|
| Protein GI | 241663006 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4320] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.926489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0309709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAAA CTACCCGTAT CCTTCTTGAA TACAACGCCG GGCGTGATCC CGAAAGGCTT
ACCCGAAAAC TGGATGCCAT TGCCGCCGAC CCATTTTCAT TTTTTCGCGG CACCAACAAC
CTGTACGCCG CGTCTCTGGC CGATGCCGCC TTGCTGCACG ACGCGCCCCG CACGCTGGTC
TGCGGCGACC TGCACCTTGA AAACTTCGGC AGCTTCAAGG GCGACAACGG CCTGGTCTAC
TTCGACATGA ACGACTTTGA CGAAGCCCTC GCCGCGCCGT TTACGGTCGA CCTGGTGCGC
GTGCTGTCGA GCCTGCAGGT GGCATCATTC GGCTGGAAGC TGGCCGATGA AGACGCTCAT
AACCTGTGCC GGCGCTTTCT TGACACGTAT GCGGCCGCGC TGGTGGAAGG CAAGCCCCGC
TGGGTGGAGC GGGCAACCGC CACGGGCATC GTGCGCGATC TGTTGCGTGC CTTGCGCAAA
CGCAACCGCG CGGCCTACCT TGCGCAGCGC ACGGAGCGCG TCGGCAACCG CATTTCGCTG
CGCATTGACG GGCGCCGCAC ATTGCGTGCC AGCAAGGACG AGGCCCGCCG CGCGCGGCGC
ATTCTCGAGG CGTACGGCCA GCAGGGCGAC GGCCAGCGTT TTGTTGCCGT CGACGTTGCC
CGGCGGATTG CCGGTACGGG CAGCCTGGGG CTTGAGCGCT ATTCCGTGCT GGCTCGCCCC
GAAAACGACC CCACCACCCT GCGCCTGATC GACATCAAGC TGTCGATTCC GAGCGTATGG
GCCGGCGTGC TGGGCAGTGC ATGCAGCGTG GCGCCCTGGC ATAGCGAGGC AGGGCGCGTT
GTCGATATCC AGCGCGTTTC GCAGGCGATT TCGCCCGCGC TGCTGCGTGG CGTCGTCTAC
GGCGCTAAGG GCGAAAAGCC GAAGTCGTAC GTCGTCAAGA GCCTGCAGCC GACGGCCGAT
CGCGTCGCGC TCGGCTCGGG CAAGAACGTG GTCGCCAATC TGGACGATGC ACTGCAGACC
ATGGCTCACG TGGCGGCCTG GTGCCATCTG CGCGGCTGTG GCCGCCACGG GACGGATCTC
GTGGAGAAGG TGCAGGACTA CGCGGCCGGC ACGGCGTGGC GCAAATCGGC GCTGAAGCTG
GCGGCGCACG GCCGCAAGGT GTCGTTGAAG CAATGGACCG AGTTTGCTGA GGACTACCGC
CAGGCGCGTG GTGACAGGGC CACTTAA
|
|---|
| Protein sequence | MHETTRILLE YNAGRDPERL TRKLDAIAAD PFSFFRGTNN LYAASLADAA LLHDAPRTLV
CGDLHLENFG SFKGDNGLVY FDMNDFDEAL AAPFTVDLVR VLSSLQVASF GWKLADEDAH
NLCRRFLDTY AAALVEGKPR WVERATATGI VRDLLRALRK RNRAAYLAQR TERVGNRISL
RIDGRRTLRA SKDEARRARR ILEAYGQQGD GQRFVAVDVA RRIAGTGSLG LERYSVLARP
ENDPTTLRLI DIKLSIPSVW AGVLGSACSV APWHSEAGRV VDIQRVSQAI SPALLRGVVY
GAKGEKPKSY VVKSLQPTAD RVALGSGKNV VANLDDALQT MAHVAAWCHL RGCGRHGTDL
VEKVQDYAAG TAWRKSALKL AAHGRKVSLK QWTEFAEDYR QARGDRAT
|
|---|
| |