| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1383 |
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| Symbol | |
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| ID | 8019028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1463015 |
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| End bp | 1463710 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830162 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_002981343 |
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| Protein GI | 241662983 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA CCACACTGCG TGAATCGCTC GAACGTGCCC AGGCAACGGC CATGACGACC
ACGCCGCCGT TCGCGCATTT CAACGAGACC GCTTCGCAGA CGGGCGGCCC CTACGTGCAC
ATTGGCCTTG CACCGCGCCA GGCCGGCTTC GACATCTACG ACAAGGAATT CGGCAGCGTC
CTGACCACGC CCGCCACGCG CGGCGAACGC ATCGCGCTGG AAGGCCGCGT CTACGATGGC
TCCGGCTCGC TCGTGCGCGA TGTGCTGATC GAGATCTGGC AAGCCAACGC GGACGGCAAA
TACGCCCATC CGGCCGATCG ACAAGATAAA CCTGTCGACC CGGCATTCCG TGGCTGGGGC
CGCGCCGGGG CGGATTTCGT TACGGGCGTC TATCGTTTCG ATACCATCAA GCCGGGCGCC
GTGGCCGGCC GCAGCGGTAC CACGCAGGCA CCGCACATCT GCATGATCCT GTTTGCGCGC
GGCATCAACC TCGGCCTGCA TACGCGCGTG TACTTCAGCG ATGAGGCCGC AGCCAACGGC
ACGGACCCGG TGCTGAATGG CATCGAGTGG GAAGTGCGCC GCAAGACGCT GATTGCACAG
CGCAGCGAGC GTAACGGCGA GGTGGTCTAC ACCTTCGACG TGCGCTTGCA AGACACGCCG
GATGGCGGCG CGGAGACGGT GTTCTTCGAT ATCTGA
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| Protein sequence | MTTTTLRESL ERAQATAMTT TPPFAHFNET ASQTGGPYVH IGLAPRQAGF DIYDKEFGSV
LTTPATRGER IALEGRVYDG SGSLVRDVLI EIWQANADGK YAHPADRQDK PVDPAFRGWG
RAGADFVTGV YRFDTIKPGA VAGRSGTTQA PHICMILFAR GINLGLHTRV YFSDEAAANG
TDPVLNGIEW EVRRKTLIAQ RSERNGEVVY TFDVRLQDTP DGGAETVFFD I
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