| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1382 |
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| Symbol | |
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| ID | 8019027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1462266 |
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| End bp | 1463015 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644830161 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_002981342 |
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| Protein GI | 241662982 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.789862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC CGCTTTCCGG CACCGGCGAA TTCGCCCAGC GCGACACCGC GCAGCACCCG
CCCGCACTGA CTCCCGGCTA CAAGACCAGC GTGCTGCGCT CGCCGCGCAA CGCGCTCATC
TCCACCCTGA ATACGCTGTC CGAGACCACC GCTCCGGTGT TCCAAGCCGA CGACCTGGGC
GCGCTCGACA ACGATCTGAT CCTCAACTAC GCCAAGGAAG GCCTGCCGAT CGGCGAGCGC
ATCATCGTCC ACGGCTACGT GCGCGACGAG TTCGGCCGCC CCGTGCCGAA CGCGCTGGTG
GAGGTGTGGC AGGCCAACGC CGGCGGCCGC TACCGCCACA AGAAAGACCA GTACATCGCG
CCGATCGACC CGAACTTTGG CGGCTGCGGC CGCATGCTGA CGGATGCCAA CGGTTACTAC
GTCTATCGCA CCATCAAGCC GGGTCCGTAT CCGTGGCGCA ATCGCATCAA CGACTGGCGC
CCGTCGCACA TCCATTACTC GCTCTCGGGC GATGGCTGGG CCCAGCGCCT GATCACGCAG
ATGTACTTCG AGGGCGACCC GATGATCGCG CAATGCCCGA TCATAAAGAC CATCCCGAGC
GAAGAGCAGG TGCGCGGTCT GATCGCGCTG CACGACACGG CCAACCACGT GCCGCTCGAC
AGCCGCTGCT ACCGCTTCGA CATCACCTTG CGCGGCCGCC GTGCCACGCA TTTCGAAAAC
GCCGTGCCCG CACTGCAAGG AGCCAAGTGA
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| Protein sequence | MTLPLSGTGE FAQRDTAQHP PALTPGYKTS VLRSPRNALI STLNTLSETT APVFQADDLG
ALDNDLILNY AKEGLPIGER IIVHGYVRDE FGRPVPNALV EVWQANAGGR YRHKKDQYIA
PIDPNFGGCG RMLTDANGYY VYRTIKPGPY PWRNRINDWR PSHIHYSLSG DGWAQRLITQ
MYFEGDPMIA QCPIIKTIPS EEQVRGLIAL HDTANHVPLD SRCYRFDITL RGRRATHFEN
AVPALQGAK
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