| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1381 |
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| Symbol | |
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| ID | 8019026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1461228 |
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| End bp | 1462172 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644830160 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002981341 |
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| Protein GI | 241662981 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.31695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGTG CTTTCTCAGC GGACTTGCCG TCCCGCATCC GCTTTCGCCA TCTGAGCTGC
TTTGTCGCCA TCGCGCAGGA GCGCAATCTC CGGCGCGCCG CCGAGCGGTT GCATCTGAGC
CAGCCGGCGG TGTCGAAAAC GCTCGGTGAG CTCGAGGCGC TGGCCGGCGT GCAGCTTGTC
GAGCGTGGCC GGCAAGGCGC GCGGCTCACC GCGGCCGGCG AGCAATTCCT GCGGCATGCA
GTGGGCGTGA CGCAGGCGCT GGAATCGGCC ACCGCCGCGC TGATGGGATC GACGGACGCA
TCCGCGCCGG TCGTGCATGT GGGCGCCCTG CCGACGGTGG CCAGCAGCCT CCTGCCGCAG
GCGATTGCCC GCCTGCACAC ACAGCGCCCG CATGCCGGCG TGCGGTTGCG CACCGGCACC
AATGTCGAGT TGCTGACCGC GCTCAAGGCC GGCGAACTCG ATTTCATCGT CGGGCGCATG
GCCGAGCCCG ACCGCATGCA GGGGCTGTCG TTCGAGTTGC TGTATGCAGA GCCGCTGGCG
CTGGTCGTGC GGCCCGGACA TCCGCTGCTG ACGCTGCCGG GTGCATCCGC CTCGCTGCAG
GCGGTGCTGG ATTACCCGCT CGTGATCGCC ACGCCTGGCA CGGTGCCCCG CCATCACACC
GAAGCGCTGT TCCAGACGCA CGGGCTGCGC TTGCCGGCGG GCGTGACGGA AACGCTTTCG
GTGTCCGTCG CACGGTTGCT GGCGTGCCGA TCCGATGCGG TGTGGATCAC CCCCGAGCGC
GCAGCGGGCG ACGACATGGC GCATGGTCAA CTTGCCCGTC TGGATATTGC CACGTCGGGC
ACCAAGGAAC CCGTCGGCCT GCTGCGCAGA AGCGCCGCCA CGCCCAGCGA ACTGGCCAGC
GCGTTCATGG AACTGCTGAC CAAGCTGGCG CAGACGCCCG ATTGA
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| Protein sequence | MESAFSADLP SRIRFRHLSC FVAIAQERNL RRAAERLHLS QPAVSKTLGE LEALAGVQLV
ERGRQGARLT AAGEQFLRHA VGVTQALESA TAALMGSTDA SAPVVHVGAL PTVASSLLPQ
AIARLHTQRP HAGVRLRTGT NVELLTALKA GELDFIVGRM AEPDRMQGLS FELLYAEPLA
LVVRPGHPLL TLPGASASLQ AVLDYPLVIA TPGTVPRHHT EALFQTHGLR LPAGVTETLS
VSVARLLACR SDAVWITPER AAGDDMAHGQ LARLDIATSG TKEPVGLLRR SAATPSELAS
AFMELLTKLA QTPD
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