| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1362 |
|---|
| Symbol | |
|---|
| ID | 8019007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1444012 |
|---|
| End bp | 1446399 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830142 |
|---|
| Product | phosphoenolpyruvate synthase |
|---|
| Protein accession | YP_002981323 |
|---|
| Protein GI | 241662963 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.106247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAACC TGTCGCAAGA CGGCGCCTAT GTGCTGCCGT TCGAGCAATT GCGGATGACC
GATGTCGAGG TCGTTGGCGG TAAAAACGCT TCGCTGGGCG AGATGATCTC CCAGCTGGAT
GGCGCCGGCG TGCGCGTTCC GGGCGGTTTT GCCACGACGG CGCTGGCGTT CCGCGATTTC
CTTGCACACA ACAACCTGAC CGAGCGCATC TCGCAGCGTC TGGCCAGCCT CGACGTCGAC
GACGTCAAGG CGCTGGCTGT CGCCGGCAAG GAGATTCGTG AATGGGTCGC CACCGCGCCG
TTCCAGCCGC GTCTGGAGCA AGAGATTCGC GAATCGTACG CTCGCGTCGC GGCCCGCGAA
GGCGCCGAGG CATCGTTCGC GGTGCGCTCG TCGGCCACAG CTGAAGATTT GCCGGACGCG
TCGTTTGCCG GCCAGCAGGA GAGCTACCTC AACGTGCTCG GCATCGACGA CGTGCTCGAT
AAGATCAAGC ACGTGTTTGC GTCGCTGTAC AACGACCGCG CGATCTCCTA TCGCGTACAC
AAGGGTTTCG CGCATGACGT GGTCGCCCTG TCGGCGGGCA TCCAGCGCAT GGTGCGCTCG
GACTGCGGCG CCTCGGGCGT GATGTTCACG ATCGACACCG AATCGGGCTT CCAGGATGTC
GTTTTCATCA CCTCCAGCTA CGGCTTGGGC GAAACGGTGG TGCAGGGGGC CGTGAACCCT
GACGAGTTTT ACGTCTTCAA GCCGACGCTG GCCGCCGGCA AGTACCCGAT CATCCGCCGC
TCGATCGGGT CCAAGCTGAT CAAGATGGAA TTCACCGCGC CGGGCGAACA AGGCCGCGTG
AAGACGGTCG ACGTCCCGGG CGAACTCCGC AACCGCTACT CCATCAACGA TGCTGACGTG
GCGGAACTGG CGAAGTACGC CGTCATCATC GAGAAGCACT ACGGCCGCCC GATGGACATC
GAGTGGGGCA AGGACGGCAA GGACGGCAAG ATCTACATCC TCCAGGCTCG CCCGGAGACG
GTGAAGAGCC AGGCACACGG CAAGGTCGAG CAACGATTCC GCCTGAAGGG CTCGGCGCCG
GTGCTGACCA CCGGCCGTGC CATTGGCCAG AAGATCGGCA CGGGCCCGGT GCGCGTGATC
AACGATCCGG CTGAAATGGA ACGCGTGCAG CCGGGCGACG TGCTGGTTGC CGACATGACC
GACCCGAACT GGGAACCGGT GATGAAACGC GCCTCGGCCA TCGTCACCAA CCGTGGTGGC
CGGACCTGCC ACGCGGCCAT CATTGCGCGT GAGCTGGGTG TGCCGGCGGT GGTCGGCTGC
GGCGATGCGA CCGACCTGCT GAAGGACGGC ACGCTGGTGA CGGTCTCGTG CGCGGAAGGG
GACGAAGGCA AGATCTACGA CGGCCTGCTG GAAACCGAAA TCACGGAAGT CCAGCGCGGC
GAAATGCCCA CGATCAGCAC CAAGATCATG ATGAACGTCG GCAACCCGCA GCTCGCGTTC
GATTTCTGTC AGATTCCGAA CGGTGGCGTG GGCCTGGCCC GTCTGGAATT CATCATCAAT
AACAACATCG GCGTGCACCC GAAGGCGATT CTCGACTACC CGCAGGTCGA CAGCGACCTG
AAGAAGGCCG TGGAAAGCGT GGCCCGCGGC CATGCCAGCC CGCGTGCGTT CTATGTCGAC
AAGCTGGCCG AGGGCATTGC CACCATCGCA GCGGCGTTCT ATCCGAAACC CGTGATCGTG
CGCCTGTCGG ACTTCAAGTC CAACGAGTAC AAGAAGCTGA TTGGCGGTTC CCGCTACGAG
CCGGACGAAG AAAACCCGAT GCTGGGTTTC CGTGGCGCCT CGCGCTACAT CGCCGAAGAC
TTTGCCGAAG CCTTCGAGAT GGAGTGCCGT GCCATGAAGC GCGTGCGCGA CGAGATGGGC
CTGACCAACG TCGAAGTGAT GGTGCCGTTC GTGCGTACGC TCGGCCAGGC TGAGAAGGTT
GTCGAGCTGC TGGCCAAGTA CGGCCTGAAG CGCGGTGAGA ACGGCCTGCG CCTGATCATG
ATGTGCGAAG TGCCATCCAA CGCGATCCTG GCCGAGCAAT TCCTGCAGCA TTTCGACGGT
TTCTCGATCG GTTCGAACGA CCTGACGCAG CTCACGCTCG GCCTGGACCG CGACTCCGGC
ATGGAGCTGC TGGCCAAGGA CTTCGACGAG CGCGATCCGG CGGTCAAGTT CATGCTGCAG
CGCGCCATCT CCACGGCGCT GTCGATGAAC AAGTACGTCG GCATCTGCGG TCAGGGCCCG
TCCGATCATC CGGATTTTGC CGAGTGGCTG GCCAAGGAAG GTATCTCGTC GATCTCGCTG
AACCCGGATT CGGTGGTCGA CACATGGCAG AAGCTCGGTT CGGCTTGA
|
|---|
| Protein sequence | MTNLSQDGAY VLPFEQLRMT DVEVVGGKNA SLGEMISQLD GAGVRVPGGF ATTALAFRDF
LAHNNLTERI SQRLASLDVD DVKALAVAGK EIREWVATAP FQPRLEQEIR ESYARVAARE
GAEASFAVRS SATAEDLPDA SFAGQQESYL NVLGIDDVLD KIKHVFASLY NDRAISYRVH
KGFAHDVVAL SAGIQRMVRS DCGASGVMFT IDTESGFQDV VFITSSYGLG ETVVQGAVNP
DEFYVFKPTL AAGKYPIIRR SIGSKLIKME FTAPGEQGRV KTVDVPGELR NRYSINDADV
AELAKYAVII EKHYGRPMDI EWGKDGKDGK IYILQARPET VKSQAHGKVE QRFRLKGSAP
VLTTGRAIGQ KIGTGPVRVI NDPAEMERVQ PGDVLVADMT DPNWEPVMKR ASAIVTNRGG
RTCHAAIIAR ELGVPAVVGC GDATDLLKDG TLVTVSCAEG DEGKIYDGLL ETEITEVQRG
EMPTISTKIM MNVGNPQLAF DFCQIPNGGV GLARLEFIIN NNIGVHPKAI LDYPQVDSDL
KKAVESVARG HASPRAFYVD KLAEGIATIA AAFYPKPVIV RLSDFKSNEY KKLIGGSRYE
PDEENPMLGF RGASRYIAED FAEAFEMECR AMKRVRDEMG LTNVEVMVPF VRTLGQAEKV
VELLAKYGLK RGENGLRLIM MCEVPSNAIL AEQFLQHFDG FSIGSNDLTQ LTLGLDRDSG
MELLAKDFDE RDPAVKFMLQ RAISTALSMN KYVGICGQGP SDHPDFAEWL AKEGISSISL
NPDSVVDTWQ KLGSA
|
|---|
| |