Gene Rpic12D_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1360 
Symbol 
ID8019005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1441959 
End bp1442855 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content63% 
IMG OID644830140 
Productmetal-dependent hydrolase 
Protein accessionYP_002981321 
Protein GI241662961 
COG category[R] General function prediction only 
COG ID[COG3687] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC CCGATTACTT CATCAAGGCC CGCCACGTCC GTTTCGACTG GAAGGACACG 
CCCATCCAGT GGATTCCCGG CGATCCGTCC AGCACGCACA TCATCAACAT CCTGAACCTG
CTGTTTCCAG CCGGCGAGTT GTGGTTCTGC CGCGTTTACA ACAAGGTGCT GCCGCTGATT
ACCGACGCGA AGCTGCGCGC CGATGCCGAG GGCTTCCTGC GTCAGGAGGC GGTCCATTCG
CGCTCGCATG GCGGCGTGCT GGCGCATTAC TACAAAGACC ACGGCATCGA TACCCAGCCA
TTTACCAAGC GGCTCGACTG GCTGTTCTCC AAGGGGCTCG GCGAACAGCC GTTGGGTCTG
AAGATCGGTC ACACGCGTTT CTGGCTGCGG CAGCAACTCG GCATCATTGC TGCGCTCGAG
CACTTTTTCG GCTATCTGGG CAACTGGGTG CTCAACGCAA AGGGGCTCGA CGCCGCCCAA
GCCGATCCCG TCATGCTGGA CTTGTTGCGC TGGCATGGCG CGGAGGAAGT CGAGCACCGC
ACCGTCGCGT TCGACATCTT CCGGCACATG GGCGGCTCGT ATCTCGAACG CTGCTTCCAT
ATGCTGACCA CGATCCTGTT GCTCCTGTAC TTCTTGGTCA CCGGCTTCGG CTTCATGTAC
CAGCGCGATC CGGGGGCGGG CAGGTTCCCC GGTTTTATCC GCGGCTGGTG GCATGGCTCG
CGGCGTAACT GCCTGCCATC GTTCTGGAAA ATGCTGGGGG CCGCGCTGCG CTATTTCCGG
CCCAGCTATA CGCCGCATCA TGAAGGGTCG ACCGAGCAGG CGCTGGCCTA TCTGGAAATA
TCGCCGGCAG CGCAGGCCGC GGCGCACGGC GGCAACTGGG TGCGTGATCG CGCCTGA
 
Protein sequence
MTAPDYFIKA RHVRFDWKDT PIQWIPGDPS STHIINILNL LFPAGELWFC RVYNKVLPLI 
TDAKLRADAE GFLRQEAVHS RSHGGVLAHY YKDHGIDTQP FTKRLDWLFS KGLGEQPLGL
KIGHTRFWLR QQLGIIAALE HFFGYLGNWV LNAKGLDAAQ ADPVMLDLLR WHGAEEVEHR
TVAFDIFRHM GGSYLERCFH MLTTILLLLY FLVTGFGFMY QRDPGAGRFP GFIRGWWHGS
RRNCLPSFWK MLGAALRYFR PSYTPHHEGS TEQALAYLEI SPAAQAAAHG GNWVRDRA