| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1356 |
|---|
| Symbol | rnhB |
|---|
| ID | 8019001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1437579 |
|---|
| End bp | 1438277 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644830136 |
|---|
| Product | ribonuclease HII |
|---|
| Protein accession | YP_002981317 |
|---|
| Protein GI | 241662957 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCC GCAAACCCAA TCCCGACCAG CTCGGCCTGC TGCTCTCGCA AGAGCCGGCG
GCCAAGCGTG CGCGTCGCAT CCTGTGCGGC GTGGATGAGG CTGGACGCGG GCCATTGGCC
GGGCCGGTGA CGGCTGCGGC GGTCGTTCTC AATCCGCGCA AGCCGATCAA GGGCCTGGCC
GACTCAAAAA TTCTGACCGC CAAGAAGCGG GAAGCGCTCT ACGACGAGAT CGTCGAAAAG
GCGCTCGCCT GGCACGTGGC CGAAGCCACC GTCGAGGAAA TCGATCGCAT CAACATCCTG
CATGCAACCA TGCTCGCCAT GCAGCGCGCG GTGCATGGCG TGGCCGCACT GGGCACGCTG
CCCGATCTCG TGCAGGTGGA CGGCAATCGT TGCCCGCAGG TGGCGTTTGC GGTGGAGGCC
GTCGTCAAGG GCGATGCGCT GGTGCCGGCC ATTTCAGCGG CGTCCATCCT GGCGAAGGTC
ACGCGCGATC GGCAGTTGGC CGCGCTGCAT GTCGAGTTTC CGCTTTACGG TTTTGACGTC
CATGCCGGCT ATGGCACACC GCAGCATCTG GCCGCCATCG ACCTGCATGG CGTGACGCCG
CATCATCGCC GCTCGTTCGC GCCCGTGCGC CGTGCACTGG ATGGGATGAG TGCGATCAGC
ATCGAAACCA CCGCTGCAGT CAGCGCCTGG GACGACTGA
|
|---|
| Protein sequence | MASRKPNPDQ LGLLLSQEPA AKRARRILCG VDEAGRGPLA GPVTAAAVVL NPRKPIKGLA
DSKILTAKKR EALYDEIVEK ALAWHVAEAT VEEIDRINIL HATMLAMQRA VHGVAALGTL
PDLVQVDGNR CPQVAFAVEA VVKGDALVPA ISAASILAKV TRDRQLAALH VEFPLYGFDV
HAGYGTPQHL AAIDLHGVTP HHRRSFAPVR RALDGMSAIS IETTAAVSAW DD
|
|---|
| |