| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1352 |
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| Symbol | lpxD |
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| ID | 8018997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1434014 |
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| End bp | 1435087 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830132 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_002981313 |
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| Protein GI | 241662953 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.169621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTT CGCTTGGTGA ACTTGCTGCG TCGCTCGGCG CGACCGTCCA GGGTGACGCA
GGCCTGATCG TCAAGTCGAT CGCGCCGCTG GATCAAGCGG GCGCCGATCA GCTCGCTTTT
CTCTCCAATC CGCTGTACCT CAATCAGGCT GTGAGTTCCG GCGCGGGTGC GATCATCGTG
TCGCTCCGCG ATCTGGAAAC GCTTGAAAGC CAGGGCCACG CTGCTGGCCG GAACTGGCTG
ATTGCGGCCA ATCCGTATGC TGCGTTTGCT CGCGTTGCTC AGCGCTTTGT TGCGCTGGCG
GCGCGCCCCG TTGTGCCGGG CATCCACCCG AGTGCCAGCG TGGAAGAGGG CGCCAAGGTG
CCGGCATCCT GCTCCATCGG CCCGAACGTC ACCATCGAAG CCGGTGCTGT GCTCGGCGAG
CGTGTGCGCA TCGCCGGCAA CAGCTTTGTT GGCGCCGGTG CCCGCATTGG CGATGACACG
TTGCTTCACG CGAACGTTTC GATCTACCAC GGCTGCGAGG TGGGGGCGCG CTGCATTCTG
CATAGCGGCG TCGTGATCGG TGCGGATGGC TTCGGCTTTG CCCCTGACTT TGGTCCGCAG
GACGGCGAAT GGGTGAAGAT TCCCCAGGTC GGCCGGGCCG TAATTGGCGA CGACGTGGAG
ATCGGCGCGA ACACCGCCAT CGACCGCGGC GCGATGGCCG ATACCGTGGT CGAGCAGGGC
TGCAAGATCG ATAACCAGGT GCAGATCGCG CATAACGTGC ATGTGGGCGC CTATACCGTG
ATCGCCGGCT GCGCGGCCAT TTCCGGCAGT ACGAAGATCG GGCGCTACTG CATCATCGGC
GGTGCGGCCA ATTTTGCCGG CCACCTGACC ATTGCGGACC GCGTGACCGT TTCGGGCGGC
ACCTCCATTA CCAAATCCAT CACCAAGCCC GGTGGCCACT TCACCAGCGT TTTCCCGTTC
ATGCCGCATG GCGACTGGGA GCGTAACGCG GCCATCGTCC GAGGCCTGAC GCGCATGCGC
GAACGGTTGC AACAACTCGA ACAGCGGGTC AAAGACCTGC AGCAACAACC ATGA
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| Protein sequence | MSFSLGELAA SLGATVQGDA GLIVKSIAPL DQAGADQLAF LSNPLYLNQA VSSGAGAIIV
SLRDLETLES QGHAAGRNWL IAANPYAAFA RVAQRFVALA ARPVVPGIHP SASVEEGAKV
PASCSIGPNV TIEAGAVLGE RVRIAGNSFV GAGARIGDDT LLHANVSIYH GCEVGARCIL
HSGVVIGADG FGFAPDFGPQ DGEWVKIPQV GRAVIGDDVE IGANTAIDRG AMADTVVEQG
CKIDNQVQIA HNVHVGAYTV IAGCAAISGS TKIGRYCIIG GAANFAGHLT IADRVTVSGG
TSITKSITKP GGHFTSVFPF MPHGDWERNA AIVRGLTRMR ERLQQLEQRV KDLQQQP
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