Gene Rpic12D_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1347 
Symbol 
ID8018992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1427544 
End bp1428362 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID644830127 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_002981308 
Protein GI241662948 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0719671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.74343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGA CTCGCGTCAT TACCGCTGTC TGCCTGCTGA TTGTCATCCT GCCCATTCTG 
TTTTTCGCGC CGCCCGCCGG CCTGGCCGGG CTGGTGACGG TATTTGCCGC CCTCGCAGCG
TGGGAGTGGG GGCGTCTCGT GCGCCTGACC GGCTGGTGGG GCCCCATTCT CTATGCCGTC
GTGGTCGTCA TGCTGACGAT CGCCTGGCAC GACATACCCG TTCGTGGTGA TGTGCGGCCG
CTGTTCCATG GCGCAGTCAT CGCCTGGGTG ATCGCCTGGG CGCTGCTGGC AGGTGGCGTG
CGCGAGTTGC ATGGCACGCG CAGAATCGTT TTCGCGCTAC TTGGCTTGGT GATGTTGCCG
GCGTTTGTGC ATGGCGCCAT TGAATTACGC ACGCACGGCA TCGCGTTTCT GCTTTCGGTG
GCGCTGCTCG TGTGGGCCGC TGATGTGGGC GCCTATTTTG TCGGCAAGGC CATTGGTCGC
CGTAAGCTTG CTCCGACCAT CAGCCCCGGC AAGTCCTGGG AAGGTGCAAT CGGCGGTGCT
GTGCTCGTCG CGGTGATTGC GACTGCCGCC GGTGTTACGC ACTGGTTTGC GCCGACGTGG
TTTTCGCACG AGTTTGATCA GCGCGGTGCC GTCGTTGCCT TGGCGCTGAC CATCTTGCTG
GTGGCCGCAA GCGTCGGCGG CGATTTGTTT GAATCCCTGC TCAAGCGTCA GGTCGGCATG
AAAGACAGCA GCCGCCTGTT GCCCGGCCAC GGCGGTGTGC TCGACCGTAT CGACGCGCTG
CTGCCGGTGC TTCCGCTCGC GGCGCTGCTG ATTTCCTGA
 
Protein sequence
MLLTRVITAV CLLIVILPIL FFAPPAGLAG LVTVFAALAA WEWGRLVRLT GWWGPILYAV 
VVVMLTIAWH DIPVRGDVRP LFHGAVIAWV IAWALLAGGV RELHGTRRIV FALLGLVMLP
AFVHGAIELR THGIAFLLSV ALLVWAADVG AYFVGKAIGR RKLAPTISPG KSWEGAIGGA
VLVAVIATAA GVTHWFAPTW FSHEFDQRGA VVALALTILL VAASVGGDLF ESLLKRQVGM
KDSSRLLPGH GGVLDRIDAL LPVLPLAALL IS