Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1342 |
Symbol | rpsB |
ID | 8018987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1423085 |
End bp | 1423828 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644830122 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_002981303 |
Protein GI | 241662943 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.298701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.417524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTAA CCATGCGCGA AATGCTGGAA GCCGGTGTCC ACTTTGGCCA CCAGACCCGC TTCTGGAACC CCAAGATGGC CCCTTACATC TTCGGCCATC GCAACAAGAT TCACATCATC AACCTGGAAA AGACGCTGCC GATGTACCAG GACGCACTGA AGTACGTGCG CCAACTGGCA GCCAACCGGG GCACCATTCT GTTCGTTGGT ACGAAGCGTC AATCGCGCGA GATCCTGGCT GAAGAAGCGG CTCGCGCAGG CATGCCGTTC GTCGACAGCC GCTGGCTCGG CGGCATGCTG ACCAACTTCA AGACGGTCAA GACCTCGATC AAGCGCCTGA AGGACATGGA AGTCGCCAAG GAAGCCGGCG CGACCGAAAC CATGAGCAAG AAGGAAGCGC TGATGTTCGA ACGCGAAATG GACAAGCTGG TGAAGTCCAT TGGCGGCATC AAGGACATGG GCGGCATTCC GGACGCCATC TTCGTGGTGG ACGTTGGTTA CCACAAGATT GCCGTGACCG AAGCTGCCAA GCTGGGTATT CCGGTGATCG GCGTGGTTGA CACGAACCAC TCGCCGGAAG GCATCGACTA CGTCATCCCG GGTAACGACG ACTCGAGCAA GGCTGTTGCA CTGTACGTGC GCGGCGTGGC CGACGCGATC CTGGAAGGCC GTGCGAATGC GGTCCAGGAA GTGGTTGAAG CCGCTCGCGG CGGCGACGAC TTCGTCGAAG TCCAAGAAGG CTAA
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Protein sequence | MSVTMREMLE AGVHFGHQTR FWNPKMAPYI FGHRNKIHII NLEKTLPMYQ DALKYVRQLA ANRGTILFVG TKRQSREILA EEAARAGMPF VDSRWLGGML TNFKTVKTSI KRLKDMEVAK EAGATETMSK KEALMFEREM DKLVKSIGGI KDMGGIPDAI FVVDVGYHKI AVTEAAKLGI PVIGVVDTNH SPEGIDYVIP GNDDSSKAVA LYVRGVADAI LEGRANAVQE VVEAARGGDD FVEVQEG
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