| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1333 |
|---|
| Symbol | |
|---|
| ID | 8018978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1407107 |
|---|
| End bp | 1408153 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644830113 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_002981294 |
|---|
| Protein GI | 241662934 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.59598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.687986 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTTC GTTCGATTTC CATCGCGCTG ACGTTTGCAC TGTCAACGGC CGCTCCGGCC
GCGCACGCCG CTCCGGCGGA GACCGGCCCC GCGTATGGCC CGCGCCTGGA AGGCTTCGAT
TACCCGGCGC CCGTCAAGGT CTTCAAGTTC GAGTCGCAGG GCGCCGCACT GGAGATGGCG
TATCTGGATG TTGCGCCCAA GCAGCCCAAC GGCCAGGTGG CGGTGCTGCT GCACGGCAAG
AACTTCTGCG CGGCCACGTG GGAAGGCACC ATCGCCGCGC TGACGGGTGC CGGCTACCGC
GTGATCGCAC CGGACCAGAT CGGTTTCTGC AAATCGAGCA AGCCGCGCGC ATATCAGTAC
ACCTTCCAGC AACTGGCCAG CAATACGCAT GCGCTGCTGG CCTCGCTGGG GGTCGAGCAG
GCCATCCTGA TCGGCCACTC GACGGGCGGC ATGCTGGCGA CGCGCTACGC GCTGATGTAT
CCGAACGCGG TGTCGCGGCT GGTGATGATC AACCCGATCG GCCTGGAAGA CTGGAAGGCC
AAGGGCGTGC CGTCCATGAC GGTCGACCAG TGGTTCGCGC GTGAGAAGCA AACCACCGCC
GAGCGCATCC GCGCCTACGA GCAGTCCACG TACTACGCCG GGCAATGGCG CGCGCAATAC
GAACCGTGGG TGCAGATGCT GGCCGGCATG TACCGTGGCC CGGGGCGGGA TCTGGTGGCG
TGGAATTCCG CGCTGCTGTA CGACATGATC TATACACAGC CCGTCGTCTA TGAGTTCAGC
CAATTGCGCC CGTCGACGCT GCTGCTCATC GGCCAGAAAG ACACCACCGC CATCGGCAAG
GACACCGCCC CGCCGGAAGC GCGGGCACAG CTGGGGCATT ACCCCGAACT TGGCCGTGCA
GCCGCCAAGG CTATCCCGCG CGCGACGTTG GTGGAATTCC CGGATGCGGG CCATGCGCCA
CAAATCCAGG ATCCTGACGC GCTGCACGAT GCGCTGCTCG ACTGGCTCGC TGCGCCGGAG
CCCTCGCGCA CCCGTCGCCC GGACTGA
|
|---|
| Protein sequence | MLLRSISIAL TFALSTAAPA AHAAPAETGP AYGPRLEGFD YPAPVKVFKF ESQGAALEMA
YLDVAPKQPN GQVAVLLHGK NFCAATWEGT IAALTGAGYR VIAPDQIGFC KSSKPRAYQY
TFQQLASNTH ALLASLGVEQ AILIGHSTGG MLATRYALMY PNAVSRLVMI NPIGLEDWKA
KGVPSMTVDQ WFAREKQTTA ERIRAYEQST YYAGQWRAQY EPWVQMLAGM YRGPGRDLVA
WNSALLYDMI YTQPVVYEFS QLRPSTLLLI GQKDTTAIGK DTAPPEARAQ LGHYPELGRA
AAKAIPRATL VEFPDAGHAP QIQDPDALHD ALLDWLAAPE PSRTRRPD
|
|---|
| |