| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1331 |
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| Symbol | |
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| ID | 8018976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1404812 |
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| End bp | 1406011 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644830111 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_002981292 |
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| Protein GI | 241662932 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.785266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCCGC GCCTGTCCGC CCTACAGCCG TATCCGTTCG AGAAACTGAA AGCGCTTGTG
AAGGACGTCA CGCCCAGCGC CGCCCATACG CCGATCAGCT TTGGCATCGG CGAGCCCAAG
CACCCGACGC CGGCCCTGGT GAAAGACGCG CTGACGGCGG CGCTCGGCGG GCTGGCGAAT
TATCCCACGA CGCTTGGCTC CGATGCACTG CGACAGTGCA TCGCTGCATG GCTGGAGCGC
CGCTACGGCT TGCCGAAGGT CGACCCAGCC ACTGAAGTCA TCCCCGTCAA CGGCTCGCGC
GAGGCGCTGT TCTCGTTCGC GCAGACCGTG ATCGACGGCA GCAAGCCCGG TGCCCGCGTG
CTGTGCCCGA ACCCGTTCTA CCAGATCTAC GAAGGCTCGG CGCTGCTGGC CGGTGCCACG
CCCCTGTTCG CCAACAGCGA CCCGGCGCGC AACTACGCAC CCGATTTCGC CGCGATCACG
CCCGAAGAAT GGCGCAACGT GCAGCTCGTC TTCGTATGCA GCCCCGGCAA CCCGACCGGC
GCCGTGCTCA CCCTCGAAGA CTGGAAGCAA CTCTTCGCCT TGTCGGACGA ATACGGCTTC
ATCATCGCGT CGGACGAGTG CTACTCCGAA ATCTATTTCG ACGAGGCCAA CCCGCCGCTG
GGCGCGCTGC AGGCCGCGCA CAAGCTGGGC CGAGGCTTTG ACCGCCTCGT GATGTTCTCC
AGCCTGTCCA AACGCTCCAA CGTGCCGGGC ATGCGTTCCG GCTTCGTGGC AGGCGACGCC
AAGCTGCTCA AGGCCTATCT GCTGTATCGC ACGTATCACG GCAGCGCGAT GAGCCCGTCG
GTGCAGTCCG CTAGCATCGC TGCGTGGAAT GACGAGACCC ACGTGCGCGA CAACCGCGCG
CAATACGTCA AGAAGTTCCA ACAGGTCACG CCGATGCTGG CCGAGGTGCT GGACGTGGCC
CTGCCCGACG CAGCCTTCTA CCTGTGGGCC AACGTCAAGC GCACGGGCCT GTCGGACACT
GAATTCGCAC GCCAGCTGCT GGCCGCCAAG AACGTCGCCG TCCTGCCGGG CAGCTACCTT
GCCCGCGAGG CGCATGGCAC GAACCCGGGC CAGGACTACG TGCGCATCGC GCTGGTGGCC
GGCGTGGACG AATGCCTGGA AGGCGCGCGC CGGGTTGTCG AGTTCTGCCA GCAACGCTGA
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| Protein sequence | MNPRLSALQP YPFEKLKALV KDVTPSAAHT PISFGIGEPK HPTPALVKDA LTAALGGLAN
YPTTLGSDAL RQCIAAWLER RYGLPKVDPA TEVIPVNGSR EALFSFAQTV IDGSKPGARV
LCPNPFYQIY EGSALLAGAT PLFANSDPAR NYAPDFAAIT PEEWRNVQLV FVCSPGNPTG
AVLTLEDWKQ LFALSDEYGF IIASDECYSE IYFDEANPPL GALQAAHKLG RGFDRLVMFS
SLSKRSNVPG MRSGFVAGDA KLLKAYLLYR TYHGSAMSPS VQSASIAAWN DETHVRDNRA
QYVKKFQQVT PMLAEVLDVA LPDAAFYLWA NVKRTGLSDT EFARQLLAAK NVAVLPGSYL
AREAHGTNPG QDYVRIALVA GVDECLEGAR RVVEFCQQR
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