Gene Rpic12D_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1325 
Symbol 
ID8018970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1400492 
End bp1401394 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID644830105 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_002981286 
Protein GI241662926 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0472952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CCACCCTGCC CACCTCCCAC CCGTTCACGA CCGTTCGCGA CCTGCTGCGC 
TACGCCGTGT CGCGCTTCAC CGCCGCCGGG CTTGTCTTCG GCCACGGCAG CGAGAACGCC
TACGACGAAG CCGCTTACCT GATCCTGCAC ACGCTGCATC TGCCGATCGA TACGCTGGAG
CCGTTCCTGG ACGCACGCCT GCTGCCCGAA GAAGTGGCTG CCGTGCTGAA GGTGATCGAG
CGCCGCGCTG TCGACCGCGT GCCCGCCGCG TACATCACGC ACGAGGCGTT CATGCACGGC
ATGCGCTTCT ACGTGGACGA ACGCGTGATC GTGCCGCGCA GCTTCATCGG CGAATTGCTG
GAAGACGGCC TGGAACCGTG GATCGACCAG GAAGACGGTC CGACCGATGT GCTAGAGCTG
TGTACCGGCT CGGGCTGCCT GTCGATTCTG GCGGCGCTGC AATGGCCCAA CTCGACCATC
GACGCGGTGG ACCTTTCGCC GGATGCACTG GTGGTGGCCA ATCGCAATGT CGACGAATAC
CACCTGCAAG ACCGCATCCG CCTGCACGAA GGCGACCTGT ATGCGCCGCT GCCGCCGGGC
GTGCATTACG ACGTGATCCT CACGAACCCG CCGTACGTGA ACGAGGCATC GATGCAGGCA
TTGCCGCCAG AGTACCGTGC CGAGCCGCAC ATGGCGCTGG CAGGAGGCAA CGACGGCATG
GACATCGTCC GCCGCATCCT GGCCGATGCA CCGCGTCACC TGAAGCCGCA CGGCGTGCTG
GTGGTGGAAA TCGGTAACGA GCGCGAAAAC GTTGAAGCGG CCTTCCCGGA TCTCGACCTG
GTCTGGCTGC CGACCAGCGC AGGCGAAGAC CAGGTGTTCC TGGTTACGCG CGAGGCGCTT
TAA
 
Protein sequence
MTTPTLPTSH PFTTVRDLLR YAVSRFTAAG LVFGHGSENA YDEAAYLILH TLHLPIDTLE 
PFLDARLLPE EVAAVLKVIE RRAVDRVPAA YITHEAFMHG MRFYVDERVI VPRSFIGELL
EDGLEPWIDQ EDGPTDVLEL CTGSGCLSIL AALQWPNSTI DAVDLSPDAL VVANRNVDEY
HLQDRIRLHE GDLYAPLPPG VHYDVILTNP PYVNEASMQA LPPEYRAEPH MALAGGNDGM
DIVRRILADA PRHLKPHGVL VVEIGNEREN VEAAFPDLDL VWLPTSAGED QVFLVTREAL