Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1323 |
Symbol | |
ID | 8018968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1398661 |
End bp | 1399476 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644830103 |
Product | peptidase M55 D-aminopeptidase |
Protein accession | YP_002981284 |
Protein GI | 241662924 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2362] D-aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.035577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATCC TGATCTCCGC CGACATCGAA GGCGTGGCCA ACGTGTTCCA CCCCGAGCAG ACGCGCGCCG GCAACGGCGA ATACGAACGC GCCCGCCGCT GGATGACCGC CGAAGCCGAC GCCGCCGTGC GCGGTGCCTT CGACGGTGGT GCCACCGACG TGCTCGTCAA TGATTCGCAC GGAGGTTTTC GCAACCTCAT CCCCGATTCC ATCGACCGCC GCGCACGCTT CGTCCTGGGC AAACCGCGCT ACCTCAGCAT GATGGCCGGC ATGGACGGCT GCGACGCCGT CTGCATGATC GGCTACCACG CGCGCGCCGG CAGCCGCGGC GTGCTGGCAC ACACCATCAA CAGCTTCGCG TTTGCGCGCG TCTGGTTCAA CGAGCAGGAA CTGGGCGAGG CCGGCCTCTA CGGCGCCCTG GCCGGGGAGC GCGGCGTGCC GGTGGCCGTT GCCAGCGGCG ACGATGTATT CATCAAGGAG ACCAAACCGC TGCTGCCGCA CACCACGTTC GTCGAGACCA AACAGGCCGA AGGACAGAAC GCCGGCACAT CGCTCTCGCC CGAGCAGTCG TGCGAGGCGA TCTATGCGGC GGTAAAGGCC ACGGTGCGGC GCGGTCATTT CAGCATGCCG CTGCGCCTCC AGGCACCGAT CGTCTGCCGC CTGCAAACGC AAACACCCGC ATTGGCCGAC CTGTTCTGCC AATGGCCCGC CTTGGAGCGC GTCGACGGCA CGGTGCTGCG CTTCGCCGCC GACTCCGTAG AACATGCCGT ACGCATGCTC AACAGCCTCT CCGCCATGTC CGCGATGCTG CGTTAA
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Protein sequence | MRILISADIE GVANVFHPEQ TRAGNGEYER ARRWMTAEAD AAVRGAFDGG ATDVLVNDSH GGFRNLIPDS IDRRARFVLG KPRYLSMMAG MDGCDAVCMI GYHARAGSRG VLAHTINSFA FARVWFNEQE LGEAGLYGAL AGERGVPVAV ASGDDVFIKE TKPLLPHTTF VETKQAEGQN AGTSLSPEQS CEAIYAAVKA TVRRGHFSMP LRLQAPIVCR LQTQTPALAD LFCQWPALER VDGTVLRFAA DSVEHAVRML NSLSAMSAML R
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