Gene Rpic12D_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1313 
Symbol 
ID8018958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1386380 
End bp1386907 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content70% 
IMG OID644830093 
Productprotein of unknown function DUF523 
Protein accessionYP_002981274 
Protein GI241662914 
COG category[S] Function unknown 
COG ID[COG1683] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.369156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCG TGCTGGTGAG TGCCTGCCTG CTGGGCCAGC CGGTGCGCTA TGACGGCGGC 
ACGGTCGCCA CCGAGGGCGG CATCCTGGCC CGCTGGCAGA CGGAGGGGCG CATCGTGCCG
ATGTGCCCCG AGATGGCCGG CGGTTTGCCG GTGCCGCGTT TGCCCGCGGA AATTCACGGC
GAAGGTGGTG GCGCGGCGGT GCTGCGGGGC GCGGCCCGTG TCGTTGAACA CCACGGCCAC
GATGTCACCC AAGCGTTTCT CCAAGGCGCA CAGCGTGCAC TGGAAGCGGC GCAGGCGGCC
GGCGTGCAAG TCGCCGTGCT CACCGAGCGC AGCCCGTCTT GCGGTTCTGC GTTTCTCTAC
GACGGGACGT TTTCCAGCCA GCTGCAGGAG GGCGAGGGCG TGACGGCGGC GCTGCTGCGC
CAACACGGCA TCCGCGTATT CAGCCAGCAC CAGCTGGAAG AAGCCGGGCG CCTGCTTGAT
GCGCTCGACG CGCAGGACCG CGCCGGTTCG TCAATCGGCA AACCGTAG
 
Protein sequence
MQRVLVSACL LGQPVRYDGG TVATEGGILA RWQTEGRIVP MCPEMAGGLP VPRLPAEIHG 
EGGGAAVLRG AARVVEHHGH DVTQAFLQGA QRALEAAQAA GVQVAVLTER SPSCGSAFLY
DGTFSSQLQE GEGVTAALLR QHGIRVFSQH QLEEAGRLLD ALDAQDRAGS SIGKP