Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1308 |
Symbol | |
ID | 8018953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1380424 |
End bp | 1381218 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830088 |
Product | phage SPO1 DNA polymerase-related protein |
Protein accession | YP_002981269 |
Protein GI | 241662909 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0132537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.393253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTC GATCCCGAAT GCTCGAAGCG CTGGGCGTTT CGACCGAATG GACCTTGCGC GGGGCTGCGC CGGCCGGGTT GGAGGCCGTC GAGGTCGCCG CCGCCGAGCC GGTTGCCGTA GAGGTGGAAG CCGATTCGTT TGTTGCGGCC GAGTCCGTGC CCGTGCGAGG TGAACCGCCT GTCATGCACG CGTTATCGGA CACGGCTGCA CCACGCGCCC AGCGCATCGC CGCGTTCGAC TGGGCACAGC TCGAAGCTGC CGTTTCCAAC TGCACATCGT GCAAGCTCTG CGAGCGTCGC ACGAACACCG TTTTCGGCGT TGGCGATCGC GAGGCGGAAT GGATGCTGAT CGGCGAGGCG CCGGGTGAGC AGGAAGACAA GCAGGGCGAG CCGTTTGTCG GCCAGGCCGG CAAGCTGCTC GACAGCATGC TGCGATCGAT CGGCTTGTCG CGCGAGAAGG GCGTGTTCAT CGCCAACGTG CTCAAGTGCC GCCCGCCCGG CAATCGGGAT CCGGAGCCGG ACGAAGCAGC GATGTGCGAT CCGTATCTCA AGCGTCAGAT TGCGCTGGTC AAGCCGCGCA TCATCGTCGT GCTGGGTCGC ATTGCCGCGC AGAACCTGCT GCAGACGCAA ACGCCTGTTG GCAAGCTGCG CGGCAAGGTG CATGAGGTGG AAGGGGTGCC CGTGGTGGTG ACGTACCACC CGGCTTACCT GTTGCGCACG CTGACCGACA AGGCGCGCGC ATGGGAAGAC CTTTGCCTGG CGCGCAAGAT CTACGCGGAG CGCGGCGGCC AGTAG
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Protein sequence | MNRRSRMLEA LGVSTEWTLR GAAPAGLEAV EVAAAEPVAV EVEADSFVAA ESVPVRGEPP VMHALSDTAA PRAQRIAAFD WAQLEAAVSN CTSCKLCERR TNTVFGVGDR EAEWMLIGEA PGEQEDKQGE PFVGQAGKLL DSMLRSIGLS REKGVFIANV LKCRPPGNRD PEPDEAAMCD PYLKRQIALV KPRIIVVLGR IAAQNLLQTQ TPVGKLRGKV HEVEGVPVVV TYHPAYLLRT LTDKARAWED LCLARKIYAE RGGQ
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