| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1304 |
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| Symbol | |
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| ID | 8018949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1377218 |
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| End bp | 1378675 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644830084 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002981265 |
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| Protein GI | 241662905 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.153867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT TCACGCCCAC CCTGGAGGCG CTGCGCGCAC GTTACGGCGA GCGCTTCAAG
TGGCTCGTGC TCTTCACGCT GATGGTGGGC GCGGTGTCGT CCGTCATCTC GGCCACCATC
GTCAACGTGG CGATTCCCGA TCTGAGCCGG CATTTCGTGC TCGGGCAGGA ACGCGCGCAG
TGGGTGTCGG CCAGCTTCAT GGTGGCGATG ACGCTGTCGA TGTTGCTCAC ACCGTGGCTG
CTGTTGCGTT TCGGGCTGCG TCGTACGTTT ATCGGCGCGT TGCTGCTGCT GGGCGTCGGC
GGGCTCGCGG GCGGCCTGTC GCCCAATTAC GAAGTGATGA TCGCCATGCG GGTCGTGGAA
GGGGTTGCGG CCGGCATCAT GCAGCCGCTG CCCAACATCC TGATCCTGCG CGTGTTTCCC
GAGCGGGAGC AGGGCAAGGC GTTCGGCCTG TTCGGCTTTG GCGTCGTGCT GGCGCCGGCC
GTGGGCCCGA GCGTGGGCGG TTTCCTGGTG GAGCTGTTCG GCTGGCGCTC GATCTTCTTC
GTGGTGATGC CGTTCACGCT GATCGGCTGG GCGATGGCGC GGCGCTTCAT GGCCATCAAT
TCGTCGATGG CGGGCGAGCC CAAACCGCTC GATTGGCGTG GCCTGCTGCT GATCGGTGGT
GCGACCGTCA CGCTGCTCAA CGGACTCGTT GCGCTGCATG GCGACGCGAC GCGCGGGATC
GCGCTCATGC TCGTCTCGGC CGTGTGCCTG GCGGGCTTCG TGTTCTGGCA GCGGCGGGTG
GAGTCGCCGT TGCTGAACCT GCGGCTGTTC AGCTACCGGC AGTTTGCGAT GGGGGCGGTC
GTGGCTTTCA TCTACGGGGC AGGGCTGTAC GGTTCGACGT ACCTTGTGCC CGTGTATATG
CAGGTGGCGC TGGCCTATGC GCCGTCGCGC GCGGGGCTGG TGCTGCTGCC GGCCGGCCTC
GTGCTGGCCG TGACGATCAT GCTGGCTGGG CGCCTGACCA ATCGCATCGA GCCCTTCCGG
CTGGTGTCGT TCGGGCTGGC GGCCCTGGCG CTGTCGTTTT TCCTGATGGC CACCAACACC
CGGGCAACGA GCTATCTGCT GCTGATCGCC ATCGCCGTCA TCGGGCGGGT TGGGCTCGGT
TTCGTGCTGC CATCGCTGAG CCTTGGCGCC ATGCGCGGTG TTGATTTCAC GTTGATCCCC
CAAGGCTCCA GCGCCGTCAA TTTCCTGCGC CAATTGGGCG GGGCGATCGG CGTGTCGGCG
ACGGGCATCT TTCTGCAATG GCGGCTCGCC ACGCGCGGTA TCGAAACTGT GCATGGCGCC
GCGGTCGACC CCGACGCGCG CATCCTGGCC TTCGACGAGA CGTTCGTCTT TCTCGGCACG
TTGTGCGCGC TGGCTGTGCT GGCCGCGTGG CGCATGCGTC GCCGGGCGCT GCCGTCCGTC
ATTCCTGCCG CGCAATAA
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| Protein sequence | MTTFTPTLEA LRARYGERFK WLVLFTLMVG AVSSVISATI VNVAIPDLSR HFVLGQERAQ
WVSASFMVAM TLSMLLTPWL LLRFGLRRTF IGALLLLGVG GLAGGLSPNY EVMIAMRVVE
GVAAGIMQPL PNILILRVFP EREQGKAFGL FGFGVVLAPA VGPSVGGFLV ELFGWRSIFF
VVMPFTLIGW AMARRFMAIN SSMAGEPKPL DWRGLLLIGG ATVTLLNGLV ALHGDATRGI
ALMLVSAVCL AGFVFWQRRV ESPLLNLRLF SYRQFAMGAV VAFIYGAGLY GSTYLVPVYM
QVALAYAPSR AGLVLLPAGL VLAVTIMLAG RLTNRIEPFR LVSFGLAALA LSFFLMATNT
RATSYLLLIA IAVIGRVGLG FVLPSLSLGA MRGVDFTLIP QGSSAVNFLR QLGGAIGVSA
TGIFLQWRLA TRGIETVHGA AVDPDARILA FDETFVFLGT LCALAVLAAW RMRRRALPSV
IPAAQ
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