| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1301 |
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| Symbol | |
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| ID | 8018946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1374051 |
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| End bp | 1374749 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830081 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_002981262 |
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| Protein GI | 241662902 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0171222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0801733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGA TTCGCGCGGT GGTCTTCGAT GCCTATGGCA CGTTGTTCGA CGTGTATTCC
GTGGCCGCGC GCGCCGAGCA ACTGTTTGCC GGCAAGGGCG AAGCACTGTC GGTGCTGTGG
CGCGACAAGC AGATCGACTA CACGCGCATC CGCTCGCTGG CCGGCCCCTC GGGTGAACAC
TACAAGCCGT TCTGGGACAT CACCGTCGAT GCGCTGCGCT ATGCGGCGGC ACGCCTGGGC
GTAGAGCTTT CCGCCCATGA CGAAGCCACG CTTATGCGCG AATATGCGTG CCTGTCGGCG
TTTCCCGAGA ACGTGCCCGC GCTGCGCCGC CTGCGTGAGA TGGGCTTGCC GCTGGGCATC
CTCTCCAACG GCAACCCGCA GATGCTCGAC ATTGCCGTGA AGAGTGCCGG CATGTCCGGG
CTGTTCGATC ACGTGCTGTC GGTCGACGCG GTCAAGCTCT ACAAGACCGC GCCGCAGGCC
TATGCGCTGG CGCCACAAGC GTTTGGTGTG CCGGCGGAAC AGATTCTGTT TGTCTCGTCC
AATGGCTGGG ATGCCTGCGG CGCGACGTGG TACGGCTTCA CAACGTTCTG GATCAACCGC
CTGGGGCATC CGCCCGAGGC ACTCGACGTG GCGCCTACCG CGGCCGGCCA CGATATGCGC
GATCTGCTGC AGTTCGTGCA GGCAACACAA GCGACGTAA
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| Protein sequence | MSSIRAVVFD AYGTLFDVYS VAARAEQLFA GKGEALSVLW RDKQIDYTRI RSLAGPSGEH
YKPFWDITVD ALRYAAARLG VELSAHDEAT LMREYACLSA FPENVPALRR LREMGLPLGI
LSNGNPQMLD IAVKSAGMSG LFDHVLSVDA VKLYKTAPQA YALAPQAFGV PAEQILFVSS
NGWDACGATW YGFTTFWINR LGHPPEALDV APTAAGHDMR DLLQFVQATQ AT
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