Gene Rpic12D_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1299 
Symbol 
ID8018944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1372385 
End bp1372819 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID644830079 
ProductUspA domain protein 
Protein accessionYP_002981260 
Protein GI241662900 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0196706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.273134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGC ACATCCTCAT CCCGACCGAT GGTTCCGAGC TGTCGCGCAA GGCGGTGGCG 
GGGGCGCTCG ACTTTGCCAA GACGCTGGGC GCGCGCCTGA CGGCCTACAC CTGCCTGGAG
GAATACCCGT ACACGCCGTT TTCGGAGATC GTCGTGGAGA CACCCCAGGC GTTCAAGGAG
CGCGTCGAAG CGCAGGCGCG CGTGGTTCTC AAGGACGTGG AAGACGCCGC CGTCAGCGCC
GGCATCCGCT GCGACACCGA CATGAGCTGC TTCGCCGTCC CGTACATGGG CATCATCGAC
GCGGCCGAAC GCCATGGCTG CGACGTCATC TTCATGGCCT CGCACGGGCG GCGGGGGCTC
GCCGGGCTGC TGCTCGGCAG CGAAACGCAG AAGGTGCTCA CGCATACCGA GATTCCGGTG
ATCGTCTACC GCTGA
 
Protein sequence
MFQHILIPTD GSELSRKAVA GALDFAKTLG ARLTAYTCLE EYPYTPFSEI VVETPQAFKE 
RVEAQARVVL KDVEDAAVSA GIRCDTDMSC FAVPYMGIID AAERHGCDVI FMASHGRRGL
AGLLLGSETQ KVLTHTEIPV IVYR