Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1299 |
Symbol | |
ID | 8018944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1372385 |
End bp | 1372819 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830079 |
Product | UspA domain protein |
Protein accession | YP_002981260 |
Protein GI | 241662900 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0196706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.273134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAGC ACATCCTCAT CCCGACCGAT GGTTCCGAGC TGTCGCGCAA GGCGGTGGCG GGGGCGCTCG ACTTTGCCAA GACGCTGGGC GCGCGCCTGA CGGCCTACAC CTGCCTGGAG GAATACCCGT ACACGCCGTT TTCGGAGATC GTCGTGGAGA CACCCCAGGC GTTCAAGGAG CGCGTCGAAG CGCAGGCGCG CGTGGTTCTC AAGGACGTGG AAGACGCCGC CGTCAGCGCC GGCATCCGCT GCGACACCGA CATGAGCTGC TTCGCCGTCC CGTACATGGG CATCATCGAC GCGGCCGAAC GCCATGGCTG CGACGTCATC TTCATGGCCT CGCACGGGCG GCGGGGGCTC GCCGGGCTGC TGCTCGGCAG CGAAACGCAG AAGGTGCTCA CGCATACCGA GATTCCGGTG ATCGTCTACC GCTGA
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Protein sequence | MFQHILIPTD GSELSRKAVA GALDFAKTLG ARLTAYTCLE EYPYTPFSEI VVETPQAFKE RVEAQARVVL KDVEDAAVSA GIRCDTDMSC FAVPYMGIID AAERHGCDVI FMASHGRRGL AGLLLGSETQ KVLTHTEIPV IVYR
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