| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1298 |
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| Symbol | |
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| ID | 8018943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1370720 |
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| End bp | 1372210 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830078 |
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| Product | permease for cytosine/purines uracil thiamine allantoin |
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| Protein accession | YP_002981259 |
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| Protein GI | 241662899 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0843718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.321021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA CCACCGCTTC GGCGGCGCAG GCGGTTGATT CGCCACACGC GCATCCCCAC
GTCATCATCA AGCCGCACTA CGACCCGCGG CTCACCAACG AAGATCTGGC GCCGCTGCGC
AAGCAGTCCT GGGGCACCTA CAACATCTTC GCGTTCTGGA TGTCCGACGT GCACAGCGTG
GGCGGTTATC TGACGGCGGC GAGCCTATTC TCGCTGGGCC TGTCGAGCCT GCAGGTGCTG
TTTGCATTGC TGGTGGGCAT CGTGATCGTG CAGGTGTTCT GCAACCTCGT CGCCAAACCC
AGCCAGGCGA CGGGCACGCC GTATCCGGTG ATCTGCCGCG CGTCGTTCGG CGTGCTGGGC
GCGAACATTC CGGCCATCAT CCGCGGGCTA ATTGCGGTGG CGTGGTACGG CATCCAGACC
TATCTGGCAT CGAGCGCGTT CATCGTGCTG GCGCTGAAGT TCATGCCGCA GCTCGCGCCG
TATGCCGACG TAGCGCAGCA CGGCTTTGTC GGCCTGTCGA CGCTCGGTTG GGCGGCGTTC
ATGCTGCTTT GGGTCCTGCA GGCGTTCGTG TTCTGGCACG GCATGGAATC GATCCGCAAG
TTCATCGACT GGGCAGGCCC GGCGGTGTAT GTGGTGATGA TCGCGCTGGC CGCATGGCTG
GTGCACAAGG CCGGCTGGAA CAACATCAAC CTCACGCTTT CCTTTCTCAA ATACGAGGGC
TGGGATGCCG TGCCGGTGGT GCTCGGCGGG ATCGCACTGG TGGTGTCGTA TTTCTCCGGC
CCGATGCTGA ACTTCGGTGA CTTCTCCCGC TACGGCAAGG ATTTCACCTC CGTCAAACGC
GGCAACTTCT GGGGGCTGCC GGTCAACTTT CTCGGCTTCG CGCTGCTGAC GGTCATCACC
ACGTCGGCCA CGCTGCCGGT GTTCGGCGAG ATGATCTCCG ACCCCGTCGC CGTCGTTGCC
CGCATCGACA ACATCACGGC CGTGGTGCTC GGCGCGCTCA CGTTCATGAT CGCGACCATC
GGCATCAACA TCGTCGCCAA CTTCGTCTCG CCGGCGTTCG ATTTTTCCAA CGTGGCGCCG
CAGCACATCA GCTGGCGCAC GGGCGGCATG ATCGCGGCGG TCGCGTCGAT CTTCATCACG
CCCTGGAACC TCTACAACAA CCCCGAGGTG ATCCACTACA CGATCGACGT GCTGGGCGCG
TTCATCGGCC CGCTGTTCGG CATCCTGATC GCGGACTACT ACTTCGTGCA GCGGCAGCAG
GTGCATGTCG ACGATCTCTA CATGCTGCGC CCCACGGGCC GCTACTGGTA CCGCAACGGC
TACAACCCCG CCGCCGTCTG GACGATGATC CCGTCCGCGC TGATTCCGAT GGCGTGCGTG
GTCTTCGAAC GGCTGCATGT GCTGGCCAAT TACAGCTGGT TCATCGGCGT GGGCATCGCG
CTGGTGCTCT ACACCGTGCT CAGCCGCAAG CAAGGCACCC TCTCCCGCTA A
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| Protein sequence | MTTTTASAAQ AVDSPHAHPH VIIKPHYDPR LTNEDLAPLR KQSWGTYNIF AFWMSDVHSV
GGYLTAASLF SLGLSSLQVL FALLVGIVIV QVFCNLVAKP SQATGTPYPV ICRASFGVLG
ANIPAIIRGL IAVAWYGIQT YLASSAFIVL ALKFMPQLAP YADVAQHGFV GLSTLGWAAF
MLLWVLQAFV FWHGMESIRK FIDWAGPAVY VVMIALAAWL VHKAGWNNIN LTLSFLKYEG
WDAVPVVLGG IALVVSYFSG PMLNFGDFSR YGKDFTSVKR GNFWGLPVNF LGFALLTVIT
TSATLPVFGE MISDPVAVVA RIDNITAVVL GALTFMIATI GINIVANFVS PAFDFSNVAP
QHISWRTGGM IAAVASIFIT PWNLYNNPEV IHYTIDVLGA FIGPLFGILI ADYYFVQRQQ
VHVDDLYMLR PTGRYWYRNG YNPAAVWTMI PSALIPMACV VFERLHVLAN YSWFIGVGIA
LVLYTVLSRK QGTLSR
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