Gene Rpic12D_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1287 
Symbol 
ID8018932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1360482 
End bp1361441 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content65% 
IMG OID644830067 
Producttranscriptional regulator CysB-like protein 
Protein accessionYP_002981248 
Protein GI241662888 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.767639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.313196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCC AGCAACTGCG TTCCATCCGT GAGGCGGTGC GCCGCCAGTT CAACCTGACT 
GAAGTCGCCA ACGCGCTGTA CACGTCGCAG CCCGGCGTGT CGCGCCAGAT TCGCGAGCTG
GAGGATGAAC TGGGCGTGGA GATTTTCGAG CGCTACGGCA AGCGCCTGAC GGGCTTGACC
GAACCGGGCC GCGAGATCGT CCGCATTGTC GAGCGCCTGC TGCTCGAGGC CGAAAACCTG
CGCCAGGCCG GCGAGGAATT CTCCGGCCGG CAATCCGGCC GCCTGACCGT GGCGACGACG
CACACGCAAG CGCGCTATGC GCTGCCCAAG GTGGTGCAGT CGTTCCGCAA GGAGTATCCG
CACGTCACGC TGGCGCTGCA GGAAGCTTCG CCTTCGCACA TCGTCGAGCT GTTGCTGACG
GGGCAAGCCG ATATCGGCAT CGCCACCGAG GCGGTGGCCA ACGAGCCGGG GCTGACGTCG
TTCGAGGCGT ACCGCTGGCG CCACGTGCTG GTAGTCAGCC CGGACCATCC GCTGACCAAG
AACCCCCTCC CGACGTTGGA AGACGTGGCG CAATACCCAC TCATCACGTA CGACGCCGGT
TTTACGGGTC GACGCAACAT CGACGCGGCA TTTGCCAGTG CCGGCCTGCA CCCCGAGATC
GTGCTGACCG CCATGGACGC CGACGTGATC AAGACCTACG TGGCGCTGGA CGTGGGCGTG
GGCATCATCG CGTCGATGGC ATATGACGGA CGCAAGGACG ACAACCTTGT CTGCATCGGC
GCGGACCATC TGTTCGAGCC GAATACCACG CGTGTGGCGG TGCGCCGTGG CGCGTACCTG
CGTGGCTATG CGCACGACTT CATCGGGATG TTTGCGCCGC ATCTGTCGCG CGAAACGGTA
GCGGAGGCCG TGGCTTCGAC GGTGGTGTCG CAGTCGGTGC GAGAGGTGCT GGCGGCGTAA
 
Protein sequence
MNFQQLRSIR EAVRRQFNLT EVANALYTSQ PGVSRQIREL EDELGVEIFE RYGKRLTGLT 
EPGREIVRIV ERLLLEAENL RQAGEEFSGR QSGRLTVATT HTQARYALPK VVQSFRKEYP
HVTLALQEAS PSHIVELLLT GQADIGIATE AVANEPGLTS FEAYRWRHVL VVSPDHPLTK
NPLPTLEDVA QYPLITYDAG FTGRRNIDAA FASAGLHPEI VLTAMDADVI KTYVALDVGV
GIIASMAYDG RKDDNLVCIG ADHLFEPNTT RVAVRRGAYL RGYAHDFIGM FAPHLSRETV
AEAVASTVVS QSVREVLAA