Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1277 |
Symbol | |
ID | 8018922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1351487 |
End bp | 1352518 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644830057 |
Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
Protein accession | YP_002981238 |
Protein GI | 241662878 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.358454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.140101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCG ATTTCCAACG CCGCCGCCTG CTCAGCGCTA CCGTTGCCGG CGCATCGCTG GCCACGCTTG CGCCGGTTGC GCATGCCGCC AATGCCGCTA CCGCCGCTCC GGCGGCTGCA GCTTTGCCGA AGGTGACGCC GCCCGCGCAA CTGCGCATCG GTTTTCAGAA GAGCGCAGTC AACCTCGTCA TCGTGAAAGA GAACCGGGCG CTGGAGCAGC GCTTTCCGGG TACCAAGATC AGTTGGCTGG AGTTTCCAGC CGGGCCGCAG CAGCTTGAAG CGTTGTCTGC GGGCAGTCTC GACCTCGCCA TCACGGGCGA TACGCCGCCG GTGTTCGCGC AGGCTGCCGG CAAGGACCTG CGCTACGTGG GCGTGGAGCC GCCCAAGCCG GACAGCTCCG CCATCCTCGT GCAGCAGGAT TCGACCCTCA AGACGCTGGC CGACCTGAAG GGCAAGCGCG TGGCGCTGCA GAAGGGTTCG AGCGCGCATT TCCTGATCGT GCGCGGCCTG CAGAAGGGCG GGCTGAGCTT TGCCGACATC CAGCCCGTGT ACCTCACGCC AGCCGATGCC CGCGCCGCCT TTGAGCGCGG CAGCGTCGAC GCCTGGGGCA TCTGGGATCC GTATTACGCC GCCACCGAAC TGGCGATCAA GCCGCGCGTG CTGGCCACCG GGCGCACGCT GTCGTCCAAC AACTCGTTCT ACTTCGCGCC GACGGCCTTT ACGGAAAAGC ACGGCGACAC CATCGCCGCC ATCTTTGCAG AGCTGTCGCG CGCCGATCGC CTCGTGCAGG AGAACCGCAA GGAAGCTGCG CAGCGCATTG CAGATTTTTC GGGGCTGTCG CTGGCGACGG TGCATCTGTT CCTGTCGCGC CGGCCGCCTT CGCCGGTGCG GCCGGTGACG CCTGAAGCGA TTGCCGAGCA GCAGCGCGTG GCCGATGCCT TTCACGGGCT GGGGCTGATT CCGCGCCCGG TCAAGCCGAT CGAACTGGTC TGGCACCCGA CCCCCGCGCA GCTGGCCATT GCCCGCGCTT GA
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Protein sequence | MTIDFQRRRL LSATVAGASL ATLAPVAHAA NAATAAPAAA ALPKVTPPAQ LRIGFQKSAV NLVIVKENRA LEQRFPGTKI SWLEFPAGPQ QLEALSAGSL DLAITGDTPP VFAQAAGKDL RYVGVEPPKP DSSAILVQQD STLKTLADLK GKRVALQKGS SAHFLIVRGL QKGGLSFADI QPVYLTPADA RAAFERGSVD AWGIWDPYYA ATELAIKPRV LATGRTLSSN NSFYFAPTAF TEKHGDTIAA IFAELSRADR LVQENRKEAA QRIADFSGLS LATVHLFLSR RPPSPVRPVT PEAIAEQQRV ADAFHGLGLI PRPVKPIELV WHPTPAQLAI ARA
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