| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1263 |
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| Symbol | |
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| ID | 8018908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1335108 |
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| End bp | 1336427 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830043 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_002981224 |
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| Protein GI | 241662864 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.692056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCA TCAAGATCGG CCTGCTCGGG CTCGGTACCG TCGGTGGCGG TACCCTCAAG
GTTCTGCAAC GGAACCAGGA AGAAATCCGC CGTCGCGCGG GTCGCGGCAT TGAAGTCGCC
ATGATTGCCG TGCGCAATCT CGACAAGGCT CGTGCCATCG TGCAGGAAGC CGGTGCGACC
GTGCCGGTGG TGAACGACCC GTTTGCGATT GTGGATTCGC CCGAGATCGA TATCGTCGTG
GAGCTGATCG GCGGCTATGA CCTGACGCGC GAGCTGGTGC TGCGCGCCAT CGCCAACGGC
AAGCACGTTG TCACCGCCAA CAAGGCGCTG CTGGCCGTGC ATGGCAACGA AATCTTCAAG
GCCGCGCAGG ACAAGGGCGT GATGGTGGCA TTCGAAGCCG CCGTGGCCGG TGGCATCCCC
ATCATCAAGG CGCTGCGCGA AGGTCTGACG GCCAACCGCA TCGAGTGGAT CGCGGGCATC
ATCAACGGCA CCACGAACTT CATCCTGTCC GAGATGCGTG ACAAGGGCCT GGACTTCGAC
ACCGTGTTGA AGGAAGCCCA GCGCCTGGGC TACGCCGAGG CCGATCCGAC CTTCGACATC
GAGGGCTTTG ACGCCGCGCA CAAGCTCACG CTCATGAGCG CCATCGCCTT TGGCGTGCCG
GTGCAGTTTG AGCGCGCATA CGTGGAAGGC ATCACCAAGC TGGAAGCCGT CGACATCCGC
TACGCCGAAG AACTGGGCTA CCGCATCAAG CTGCTGGGCA TCACGCGCCG TGTCGAGGCG
GGCATCGAGC TGCGCGTGCA TCCGACACTG GTGCCGGCCA AGCGCCTGAT CGCCAATGTG
GAAGGCGCGA TGAACGCCGT GGTCGTCAAC GGCGATGCTG TGGGCCCGAC GCTGTACTAC
GGCAAGGGTG CCGGTGCTGA GCCGACCGCT TCGGCCGTCG TCGCCGATCT GGTAGACGTG
ACGCGCCTGC ATACGGCTGA CCCGGAGCAC CGCGTGCCGC ACCTGGCGTT CCAGCCGGAT
GCGCTGTCCG ACACGCCGGT GCTGCCGATC GACGAAGTGC GTTCGAGCTA CTACCTGCGC
ATGCGCGTGG CCGATGAGAC CGGCGTGCTT GCCGACATCA CGCGCATCCT GGCTGAAGGC
GGCATCTCGA TCGACGCGAT GCTGCAGAAG GAATCCCGCG AAGGCGAGCC GCAGACCGAC
ATCATCATGC TGTCGCATGT GACGGTCGAA AAACGCGTGA ACGCCGCCAT TGCCGCCATC
GAAGCGTTGC CGACCGTGCT GTCGAAGGTC ACGCGCATCC GCATGGAAGA ACTGAACTGA
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| Protein sequence | MNPIKIGLLG LGTVGGGTLK VLQRNQEEIR RRAGRGIEVA MIAVRNLDKA RAIVQEAGAT
VPVVNDPFAI VDSPEIDIVV ELIGGYDLTR ELVLRAIANG KHVVTANKAL LAVHGNEIFK
AAQDKGVMVA FEAAVAGGIP IIKALREGLT ANRIEWIAGI INGTTNFILS EMRDKGLDFD
TVLKEAQRLG YAEADPTFDI EGFDAAHKLT LMSAIAFGVP VQFERAYVEG ITKLEAVDIR
YAEELGYRIK LLGITRRVEA GIELRVHPTL VPAKRLIANV EGAMNAVVVN GDAVGPTLYY
GKGAGAEPTA SAVVADLVDV TRLHTADPEH RVPHLAFQPD ALSDTPVLPI DEVRSSYYLR
MRVADETGVL ADITRILAEG GISIDAMLQK ESREGEPQTD IIMLSHVTVE KRVNAAIAAI
EALPTVLSKV TRIRMEELN
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