| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1260 |
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| Symbol | |
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| ID | 8018905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1331411 |
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| End bp | 1333081 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830040 |
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| Product | glycosyl transferase family 39 |
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| Protein accession | YP_002981221 |
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| Protein GI | 241662861 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.367598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.736156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCG ACCGCTCCGC TCAAGCGCCC TCCCTACCCT GGCGCAATGC CTCCCTGTGG
CTGCTGGCTG CTGCGTTGCT CGCTGTCTGG CTCGGTACGC TGGGCTATCG GCACCTGATT
CCCACCGACG AAGGCCGCTA CGCCGAAATC GCGCGCGAGA TGTTCGTCTC CGGCGACTGG
GTAACCATCC GCTACAACGC CCTGAAGTAT TTCGAGAAGC CGCCGCTGCA GATGTGGGGC
ACCGCACTCG CCTATACGCT GTTCGGCATC GGCGACTGGC AGGCGCGCCT GTTCACCGCG
CTTTCCGGCA TCGTCGGCAT TGTGTTCACG ATGCTGGCGG CGGCGCGCTG GTGGGGCAAG
CGGACGGCGA TCATCAGCGG CCTGGTGCTG GTGAGCGCGC CCCTGTGGAA CGTCGGTTCG
CACTTCAATT CGCTCGACAT GGGCGTGGCC GGCTGCATGA CGATGGCGCT GGGTGCGCTG
CTGCTCGCGC AGCATCCGGG TGCCACACGC GCGCAACAAC GCGGCTGGAT GTGGGCGTGC
TGGGCATCGA TGGCGCTCGC AGTCCTGAGC AAGGGCCTGA TCGGCGTGGT GCTGCCCGGA
TTTGTGCTGG TGGTCTACAC GTTGATCGCG CGCGACTGGG CGCTCTGGAA GCGCCTGCAT
CTCGTGACTG GACTGATCAT CTTCTTTACC GTAGGGGCAC CGTGGTTCGT GCTGATCTCG
ATGCGCAACC CGGAGTTCGC GTGGTTCTTT TTTGTACACG AGCATTTCCA GCGCTTTACG
TCGACCGTGC ACAATCGAAA TGCGCCGCTT TGGTATTTCG TGCCACTTCT GGTGGCCGGC
TTCCTGCCGT GGCTCGCCCA GTTGCCCGGC GCCGCTCGCC TGGCCTTCGC CCGTGGTGAA
ACCGCCACCA ATGGCTTTCG CCCCACGCTC ATGCTCGGCC TGTGGGCCAT CCTGATCTTC
GCGTTTTTCA GCATTTCGGA CTCGAAGCTG CCGGGATATA TCTTCCCGAT CGTCCCGGCG
CTGGCGATGC TGGCCGCCCT GATGCTGGAA CGCACCAGCG AGCGCGCGTG GCGTTGGCAG
CTCAAGGGCC TCCTGGCGCT GGCACTGCTC GGCCTTGCGG CCAGCGGTTA CGTGGCGACA
ATGTCGTCCG GCATGTACCC GAACGCCGTG TTTTCCCGAT TTGCGATCTT CCTGGCCGTA
GCGTTCGTGG CGGGAGCAGG ATTCACGTGG CTCGCACTCC GCTTGGCGAA CCGACGCTTT
GAGAGCGTGG CCGCATTCGC ATGCGCATGG TTCCTGACGT TTACGGCGGC GATGCTCGGC
CACGAAGCAT TCGGGCGCTC CATGTCGGGT ATCGATCTCG TGCCTGCCGT CAGAGCCTGG
CTCAAGCCCG ACGTTCCGTT CTATGCGGTA GAGCGTCTGG ACCATACAAT GCCGTTTTAC
TTGGGCAGGC CCACCATCAT GGTGCAGGAA CCGGATGAAT TGGCCTTCGG CGTGGAGCAG
GAGCCGACCA AGTGGTTGCC GACCACCGAA GCGTTCGTGG CACGCTGGAA AGCCGGCGGC
CAGGCTGTCG CGATGATGGG ACCAGGCACC TATGACCGGC TGACAGCCCA GGGCGTACCG
ATGATCGTGA TCGCCCGCGA CGCCCGCCGT GTCATCGTCC GGCGCAACTA G
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| Protein sequence | MPIDRSAQAP SLPWRNASLW LLAAALLAVW LGTLGYRHLI PTDEGRYAEI AREMFVSGDW
VTIRYNALKY FEKPPLQMWG TALAYTLFGI GDWQARLFTA LSGIVGIVFT MLAAARWWGK
RTAIISGLVL VSAPLWNVGS HFNSLDMGVA GCMTMALGAL LLAQHPGATR AQQRGWMWAC
WASMALAVLS KGLIGVVLPG FVLVVYTLIA RDWALWKRLH LVTGLIIFFT VGAPWFVLIS
MRNPEFAWFF FVHEHFQRFT STVHNRNAPL WYFVPLLVAG FLPWLAQLPG AARLAFARGE
TATNGFRPTL MLGLWAILIF AFFSISDSKL PGYIFPIVPA LAMLAALMLE RTSERAWRWQ
LKGLLALALL GLAASGYVAT MSSGMYPNAV FSRFAIFLAV AFVAGAGFTW LALRLANRRF
ESVAAFACAW FLTFTAAMLG HEAFGRSMSG IDLVPAVRAW LKPDVPFYAV ERLDHTMPFY
LGRPTIMVQE PDELAFGVEQ EPTKWLPTTE AFVARWKAGG QAVAMMGPGT YDRLTAQGVP
MIVIARDARR VIVRRN
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