Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1255 |
Symbol | |
ID | 8018900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1326696 |
End bp | 1327754 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644830035 |
Product | NAD-dependent epimerase/dehydratase family protein |
Protein accession | YP_002981216 |
Protein GI | 241662856 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.253884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TACTGATCCT CGGCGTCAAC GGCTTCATCG GCCACCACCT GTCCAAGCGC ATCCTGGAGA CCACCGACTG GGAGGTCTAC GGTATGGACA TGCAGACCGA GCGTCTGGGC GACCTGGTCA ACCACCCCCG CATGCATTTC TTCGAGGGTG ACATCACCAT CAACAAGGAG TGGGTCGAGT ATCACGTGAA GAAGTGCGAC GTGATCCTGC CGCTGGTGGC CATCGCCACG CCGTCGACCT ACGTCAAAGA CCCGCTGCGC GTGTTCGAGC TGGACTTTGA AGCCAACCTG CCGATCGTTC GCTCGGCTGC CAAGTACGGC AAGCACCTGG TCTTCCCGTC GACCTCCGAG GTCTACGGCA TGTGCAGCGA TTCGGAATTC GATCCAGAAG CCTCGCCGCT GGTCTACGGC CCGATCAACA AGCCGCGCTG GATCTACGCC TGCTCCAAGC AGTTGATGGA TCGCGTGATC TGGGGCTACG GCATGGAAGG CCTGAACTTC ACGCTGTTCC GTCCGTTCAA CTGGATCGGC CCGGGCCTCG ACTCGATCTA CACCCCGAAG GAAGGTTCAT CGCGCGTCGT GACGCAGTTC CTCGGCCATA TCGTGCGCGG CGAGAACATC AAGCTCGTCG ACGGCGGCAG CCAGAAGCGC GCCTTCACGT ATATCGACGA CGGCATCGAC GCGCTGGTGC GCATCATCGC CAACAAGGAT GGCGTGGCCT CGGGCAAGAT CTATAACATT GGCAACCCGT CGAACAACTA CTCGGTGCGC GAGCTGGCCA ACATGATGCT GGAACAAGCC GCCCAGATCG ACGAGTACAA GGACACCGCC AAGCAGGTCC AACTCGTGGA AACGACCTCC GGCGCTTACT ACGGCAACGG CTACCAGGAC GTGCAGAACC GCGTGCCGAA GATCGCCAAC ACCATGGAAG ACCTCGGCTG GAAGCCGACC ACGGTGATGA AGGACGCGCT GGCGAACATC TTCGAAGCGT ATCGCACGCA CGTGGCTGAA GCCCGCAGCC TGGTCGAAGA CGGCAACGGC AACAAGTAA
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Protein sequence | MKKVLILGVN GFIGHHLSKR ILETTDWEVY GMDMQTERLG DLVNHPRMHF FEGDITINKE WVEYHVKKCD VILPLVAIAT PSTYVKDPLR VFELDFEANL PIVRSAAKYG KHLVFPSTSE VYGMCSDSEF DPEASPLVYG PINKPRWIYA CSKQLMDRVI WGYGMEGLNF TLFRPFNWIG PGLDSIYTPK EGSSRVVTQF LGHIVRGENI KLVDGGSQKR AFTYIDDGID ALVRIIANKD GVASGKIYNI GNPSNNYSVR ELANMMLEQA AQIDEYKDTA KQVQLVETTS GAYYGNGYQD VQNRVPKIAN TMEDLGWKPT TVMKDALANI FEAYRTHVAE ARSLVEDGNG NK
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