Gene Rpic12D_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1255 
Symbol 
ID8018900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1326696 
End bp1327754 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content60% 
IMG OID644830035 
ProductNAD-dependent epimerase/dehydratase family protein 
Protein accessionYP_002981216 
Protein GI241662856 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.253884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TACTGATCCT CGGCGTCAAC GGCTTCATCG GCCACCACCT GTCCAAGCGC 
ATCCTGGAGA CCACCGACTG GGAGGTCTAC GGTATGGACA TGCAGACCGA GCGTCTGGGC
GACCTGGTCA ACCACCCCCG CATGCATTTC TTCGAGGGTG ACATCACCAT CAACAAGGAG
TGGGTCGAGT ATCACGTGAA GAAGTGCGAC GTGATCCTGC CGCTGGTGGC CATCGCCACG
CCGTCGACCT ACGTCAAAGA CCCGCTGCGC GTGTTCGAGC TGGACTTTGA AGCCAACCTG
CCGATCGTTC GCTCGGCTGC CAAGTACGGC AAGCACCTGG TCTTCCCGTC GACCTCCGAG
GTCTACGGCA TGTGCAGCGA TTCGGAATTC GATCCAGAAG CCTCGCCGCT GGTCTACGGC
CCGATCAACA AGCCGCGCTG GATCTACGCC TGCTCCAAGC AGTTGATGGA TCGCGTGATC
TGGGGCTACG GCATGGAAGG CCTGAACTTC ACGCTGTTCC GTCCGTTCAA CTGGATCGGC
CCGGGCCTCG ACTCGATCTA CACCCCGAAG GAAGGTTCAT CGCGCGTCGT GACGCAGTTC
CTCGGCCATA TCGTGCGCGG CGAGAACATC AAGCTCGTCG ACGGCGGCAG CCAGAAGCGC
GCCTTCACGT ATATCGACGA CGGCATCGAC GCGCTGGTGC GCATCATCGC CAACAAGGAT
GGCGTGGCCT CGGGCAAGAT CTATAACATT GGCAACCCGT CGAACAACTA CTCGGTGCGC
GAGCTGGCCA ACATGATGCT GGAACAAGCC GCCCAGATCG ACGAGTACAA GGACACCGCC
AAGCAGGTCC AACTCGTGGA AACGACCTCC GGCGCTTACT ACGGCAACGG CTACCAGGAC
GTGCAGAACC GCGTGCCGAA GATCGCCAAC ACCATGGAAG ACCTCGGCTG GAAGCCGACC
ACGGTGATGA AGGACGCGCT GGCGAACATC TTCGAAGCGT ATCGCACGCA CGTGGCTGAA
GCCCGCAGCC TGGTCGAAGA CGGCAACGGC AACAAGTAA
 
Protein sequence
MKKVLILGVN GFIGHHLSKR ILETTDWEVY GMDMQTERLG DLVNHPRMHF FEGDITINKE 
WVEYHVKKCD VILPLVAIAT PSTYVKDPLR VFELDFEANL PIVRSAAKYG KHLVFPSTSE
VYGMCSDSEF DPEASPLVYG PINKPRWIYA CSKQLMDRVI WGYGMEGLNF TLFRPFNWIG
PGLDSIYTPK EGSSRVVTQF LGHIVRGENI KLVDGGSQKR AFTYIDDGID ALVRIIANKD
GVASGKIYNI GNPSNNYSVR ELANMMLEQA AQIDEYKDTA KQVQLVETTS GAYYGNGYQD
VQNRVPKIAN TMEDLGWKPT TVMKDALANI FEAYRTHVAE ARSLVEDGNG NK