Gene Rpic12D_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1253 
Symbol 
ID8018898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1325207 
End bp1325671 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content59% 
IMG OID644830033 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_002981214 
Protein GI241662854 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0142576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCA CGATCGACAA GCCTCTTCCC GATTTCTCCG CACCGGCAAC CAGCGGCATC 
ACGTTCTCAC CGGCATCGCA GCGCGGCAAG ATCGTCGTGC TGTATTTCTA TCCGAAGGAC
AACACGCCCG GCTGCACCAC CGAGGCGATG AACTTCCGCG ACCAATACGA CGCCTTTGAA
GCCGCCGGCG CCGTGGTGTT CGGCATTTCG CGCGACAGCT TGAAATCGCA CGAAAACTTC
AAAGCGAAAC TGGAGATGCC GTTCGAGCTG ATCTCCGATG CCGACGAAGC CGTCTGCAAT
ATCTTCGACA CGATCAAGAT GAAGAAGATG TACGGCAAGG ACGTGCGCGG CATCGAGCGC
AGCACATTCC TGATCGATAG CAAGGGCGTG TTGCGCAAGG AATGGCGTGG CGTGAAGGTC
CCCAACCATG TGGACGATGT TCTCGCGGCG GTGCGCGCGC TGTAA
 
Protein sequence
MPVTIDKPLP DFSAPATSGI TFSPASQRGK IVVLYFYPKD NTPGCTTEAM NFRDQYDAFE 
AAGAVVFGIS RDSLKSHENF KAKLEMPFEL ISDADEAVCN IFDTIKMKKM YGKDVRGIER
STFLIDSKGV LRKEWRGVKV PNHVDDVLAA VRAL