Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1253 |
Symbol | |
ID | 8018898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1325207 |
End bp | 1325671 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644830033 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_002981214 |
Protein GI | 241662854 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0142576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCA CGATCGACAA GCCTCTTCCC GATTTCTCCG CACCGGCAAC CAGCGGCATC ACGTTCTCAC CGGCATCGCA GCGCGGCAAG ATCGTCGTGC TGTATTTCTA TCCGAAGGAC AACACGCCCG GCTGCACCAC CGAGGCGATG AACTTCCGCG ACCAATACGA CGCCTTTGAA GCCGCCGGCG CCGTGGTGTT CGGCATTTCG CGCGACAGCT TGAAATCGCA CGAAAACTTC AAAGCGAAAC TGGAGATGCC GTTCGAGCTG ATCTCCGATG CCGACGAAGC CGTCTGCAAT ATCTTCGACA CGATCAAGAT GAAGAAGATG TACGGCAAGG ACGTGCGCGG CATCGAGCGC AGCACATTCC TGATCGATAG CAAGGGCGTG TTGCGCAAGG AATGGCGTGG CGTGAAGGTC CCCAACCATG TGGACGATGT TCTCGCGGCG GTGCGCGCGC TGTAA
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Protein sequence | MPVTIDKPLP DFSAPATSGI TFSPASQRGK IVVLYFYPKD NTPGCTTEAM NFRDQYDAFE AAGAVVFGIS RDSLKSHENF KAKLEMPFEL ISDADEAVCN IFDTIKMKKM YGKDVRGIER STFLIDSKGV LRKEWRGVKV PNHVDDVLAA VRAL
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