Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1238 |
Symbol | |
ID | 8018883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1312793 |
End bp | 1313104 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830018 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_002981199 |
Protein GI | 241662839 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.103405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.772826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA TCCGCGCCAA ATCGTTCACT GCCGAGCGTG CCTGGGGCGC GCTCGATATT GCCAATATGG GCGGCATCAC CACGCGCCTG CACTGGACAG ACCAGCCATA CCGCTGGCAC GTCAACGACG GCGAGGAGGT GTTCGTGGTG CTCGACGGCA CGGTCGACAT GCATTACCGC GAAGCCGGCG AGGAGAAAGT CGCGACGCTG GAACCCGGCG ATATCTTCTT CGCCGGGGTC GGCTGCGAGC ATGTGGCGCA CCCGCGCGGC GAGGCAAGGA TTCTCGTCGT CGAGAAAGCC GGGAGTGTTT AG
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Protein sequence | MNIIRAKSFT AERAWGALDI ANMGGITTRL HWTDQPYRWH VNDGEEVFVV LDGTVDMHYR EAGEEKVATL EPGDIFFAGV GCEHVAHPRG EARILVVEKA GSV
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