Gene Rpic12D_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1238 
Symbol 
ID8018883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1312793 
End bp1313104 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content63% 
IMG OID644830018 
Productcyclic nucleotide-binding protein 
Protein accessionYP_002981199 
Protein GI241662839 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.103405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.772826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA TCCGCGCCAA ATCGTTCACT GCCGAGCGTG CCTGGGGCGC GCTCGATATT 
GCCAATATGG GCGGCATCAC CACGCGCCTG CACTGGACAG ACCAGCCATA CCGCTGGCAC
GTCAACGACG GCGAGGAGGT GTTCGTGGTG CTCGACGGCA CGGTCGACAT GCATTACCGC
GAAGCCGGCG AGGAGAAAGT CGCGACGCTG GAACCCGGCG ATATCTTCTT CGCCGGGGTC
GGCTGCGAGC ATGTGGCGCA CCCGCGCGGC GAGGCAAGGA TTCTCGTCGT CGAGAAAGCC
GGGAGTGTTT AG
 
Protein sequence
MNIIRAKSFT AERAWGALDI ANMGGITTRL HWTDQPYRWH VNDGEEVFVV LDGTVDMHYR 
EAGEEKVATL EPGDIFFAGV GCEHVAHPRG EARILVVEKA GSV