| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1235 |
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| Symbol | |
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| ID | 8018879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1309234 |
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| End bp | 1310274 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830014 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_002981196 |
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| Protein GI | 241662836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.346697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.903363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTCAA ACCGTATTCC AATGAAATCA ACGCCTAGGC GGCTGAGCGT GGCTCCGATG
ATGGACTGGA CTGACCGACA TTGCCGGTTC TTCCATCGCC AGATCTCGCG CCACACGTGG
CTCTACACCG AAATGGTGAC CACGGGCGCG CTGCTGCACG GCGACGTCCC CCGCCACCTC
GATTTTGACG AGTTCGAGCA TCCCGTGGCG CTCCAGCTCG GCGGCAGTGA ACCGGACGAT
CTGGCCCAGG CCGCGCGCCT CGGACAGCAG TGGGGCTACA AGGAAATCAA CCTCAACTGC
GGCTGCCCGT CGGAGCGCGT GCAGCGCGGT GCGTTCGGCG CGTGCCTGAT GGCCGAACCG
AAGCTCGTCG CCCAGGGCGT CAAGGCGATG CGCGATGCGG TGTCGATTCC GGTCACGGTC
AAGCACCGTA TCGGCATCGA CGCGATCGAG ACCTACGATT TCGTGCGCGA TTTCGTCGGC
ACCATCGCCG AGGCAGGTTG CGAGACGTTC ATCGTGCACG CGCGCAATGC CATCCTGAAA
GGCCTGAGCC CAAAGGAAAA CCGCGAGATT CCGCCGCTGC GCTACGAAGT CGTCTACCAA
CTCAAGCGCG ATTTCCCGCA TCTGGAGATT TTGCTCAACG GTGGGGTGCA GACGCTCGAG
CAGATCGACG CGCACCTGGC GCACGTTGAT GGCGTCATGA TCGGCCGTGA GGCGTATCAC
CATCCGCATC TGATGGCAGC GTTCGATGCG CGCTACTACG GCGCAGGCAC CGAGGCCCCC
ACGCGCGCCG AGGTGGAAGA CGCGATGATC GGCTACGTCG GCCGCTGGGT AGAGCGTGGC
GGCTACGCAG GTGCGGCGGT GCGGCACATG CTGGGGCTGT ATCGCGGTGT GGCGGGCGCG
CGCGGCTGGC GGCGCGTGCT GTCGGACTCC AAGGCGCTGA GCCGCGTCAA GACGCTGGCC
GACGCCCATG CACTGTTCGA CGAGGCGCGT GCCCACCTGC GGCGTGGCGA AGAATCGAAT
GAGGAGGCGG TAGCGGTTTG A
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| Protein sequence | MNSNRIPMKS TPRRLSVAPM MDWTDRHCRF FHRQISRHTW LYTEMVTTGA LLHGDVPRHL
DFDEFEHPVA LQLGGSEPDD LAQAARLGQQ WGYKEINLNC GCPSERVQRG AFGACLMAEP
KLVAQGVKAM RDAVSIPVTV KHRIGIDAIE TYDFVRDFVG TIAEAGCETF IVHARNAILK
GLSPKENREI PPLRYEVVYQ LKRDFPHLEI LLNGGVQTLE QIDAHLAHVD GVMIGREAYH
HPHLMAAFDA RYYGAGTEAP TRAEVEDAMI GYVGRWVERG GYAGAAVRHM LGLYRGVAGA
RGWRRVLSDS KALSRVKTLA DAHALFDEAR AHLRRGEESN EEAVAV
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