Gene Rpic12D_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1222 
Symbol 
ID8018866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1299083 
End bp1300192 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content66% 
IMG OID644830003 
Product3-hydroxyisobutyryl-CoA hydrolase 
Protein accessionYP_002981185 
Protein GI241662825 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCA CCGCTTCCCC CGCGCCCCAG GCTGAAGTTC AACCCAACGT GATCGCCGAA 
GTACGCGGCG GCATCGGCTG GCTGACGTTG AACCGGCCGC AGGCGCTGAA CGCGCTGTCG
CTGGAGATGA TTCGCGCGAT GTCGCATGCG CTGCTGGCGT GGCAGCACGA TCCGGAAGTC
CACGCTGTCA TCCTGCGTGG CGAGGGCGGC AAAGCCCTGT GCGCAGGCGG CGACATCCGC
TTCTTCCACC GCGCCGCCAC GGCCGGCGAC CCGCAGCTCA TCACCTTTTT CACCGAGGAA
TACCGCCTCA ACCACCTGAT CTTCAGTTAT GCCAAGCCCT ACATCGCGCT GATGGACGGC
GTCGTCATGG GCGGTGGCAT GGGCATCTCG CAAGGCGCGT CGCTGCGCGT GGTGACCGAG
TGCACGAAGA TGGCCATGCC CGAAACCAAC ATCGGCCTGT TCCCGGACGT TGGCGGCGGC
TGGTTCCTGG CGCGCGTGCC GGGTCATGTG GGCGAATACC TGGGCGTGAC CGGCCAGATG
ATCGAAGCGG CGGATGCGTT GTCGATCGGC CTTGCCGATT GCCATGTCAC CACCGCGGCG
CTGGCGGCTA TCGTTCAGCG CCTGCGCGAC GGCACCTGGG GCAGCGCCGA GCAGATCACC
GCCTGCTTTA CCGAAGCCGC ATCGGCGCCC GATGATGCCA AGGCCATCAT CGCGCCTCAC
CGCGAGGCCA TCGATGCCTG CTTCAGCCAG AGCAGCGTGC AAGGCATCTT GGCCGATCTG
GCTGGCAGCA CGGATGCCGA ATGGGCCGCG CAGACCGCCG CGCACATGGT CAAGCGCTCG
CCGTTGATGA TGGCGGTGAC GCTGGAGTTG ATCCGCCGCG GCCGCCGCAC CACGTTGGCC
GATGAGCTGC GCCGCGAGCT GGACATGATG ACGCACGTGT TTGCCGAAGG CGACGGTATC
GAAGGCATTC GCGCCCTCGC GGTCGACAAG GATCATGCGC CCAAGTGGAA GCACGCCAGC
ATCGACGCCG TGCGTGACGA TGAAGTGGCC GCCTTCTTTG TTTCGCCTTG GCGCCGTGAG
CAGCATCCGC TGCTGGGGCT GTCGGACTAG
 
Protein sequence
MQSTASPAPQ AEVQPNVIAE VRGGIGWLTL NRPQALNALS LEMIRAMSHA LLAWQHDPEV 
HAVILRGEGG KALCAGGDIR FFHRAATAGD PQLITFFTEE YRLNHLIFSY AKPYIALMDG
VVMGGGMGIS QGASLRVVTE CTKMAMPETN IGLFPDVGGG WFLARVPGHV GEYLGVTGQM
IEAADALSIG LADCHVTTAA LAAIVQRLRD GTWGSAEQIT ACFTEAASAP DDAKAIIAPH
REAIDACFSQ SSVQGILADL AGSTDAEWAA QTAAHMVKRS PLMMAVTLEL IRRGRRTTLA
DELRRELDMM THVFAEGDGI EGIRALAVDK DHAPKWKHAS IDAVRDDEVA AFFVSPWRRE
QHPLLGLSD