Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1222 |
Symbol | |
ID | 8018866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1299083 |
End bp | 1300192 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830003 |
Product | 3-hydroxyisobutyryl-CoA hydrolase |
Protein accession | YP_002981185 |
Protein GI | 241662825 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCCA CCGCTTCCCC CGCGCCCCAG GCTGAAGTTC AACCCAACGT GATCGCCGAA GTACGCGGCG GCATCGGCTG GCTGACGTTG AACCGGCCGC AGGCGCTGAA CGCGCTGTCG CTGGAGATGA TTCGCGCGAT GTCGCATGCG CTGCTGGCGT GGCAGCACGA TCCGGAAGTC CACGCTGTCA TCCTGCGTGG CGAGGGCGGC AAAGCCCTGT GCGCAGGCGG CGACATCCGC TTCTTCCACC GCGCCGCCAC GGCCGGCGAC CCGCAGCTCA TCACCTTTTT CACCGAGGAA TACCGCCTCA ACCACCTGAT CTTCAGTTAT GCCAAGCCCT ACATCGCGCT GATGGACGGC GTCGTCATGG GCGGTGGCAT GGGCATCTCG CAAGGCGCGT CGCTGCGCGT GGTGACCGAG TGCACGAAGA TGGCCATGCC CGAAACCAAC ATCGGCCTGT TCCCGGACGT TGGCGGCGGC TGGTTCCTGG CGCGCGTGCC GGGTCATGTG GGCGAATACC TGGGCGTGAC CGGCCAGATG ATCGAAGCGG CGGATGCGTT GTCGATCGGC CTTGCCGATT GCCATGTCAC CACCGCGGCG CTGGCGGCTA TCGTTCAGCG CCTGCGCGAC GGCACCTGGG GCAGCGCCGA GCAGATCACC GCCTGCTTTA CCGAAGCCGC ATCGGCGCCC GATGATGCCA AGGCCATCAT CGCGCCTCAC CGCGAGGCCA TCGATGCCTG CTTCAGCCAG AGCAGCGTGC AAGGCATCTT GGCCGATCTG GCTGGCAGCA CGGATGCCGA ATGGGCCGCG CAGACCGCCG CGCACATGGT CAAGCGCTCG CCGTTGATGA TGGCGGTGAC GCTGGAGTTG ATCCGCCGCG GCCGCCGCAC CACGTTGGCC GATGAGCTGC GCCGCGAGCT GGACATGATG ACGCACGTGT TTGCCGAAGG CGACGGTATC GAAGGCATTC GCGCCCTCGC GGTCGACAAG GATCATGCGC CCAAGTGGAA GCACGCCAGC ATCGACGCCG TGCGTGACGA TGAAGTGGCC GCCTTCTTTG TTTCGCCTTG GCGCCGTGAG CAGCATCCGC TGCTGGGGCT GTCGGACTAG
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Protein sequence | MQSTASPAPQ AEVQPNVIAE VRGGIGWLTL NRPQALNALS LEMIRAMSHA LLAWQHDPEV HAVILRGEGG KALCAGGDIR FFHRAATAGD PQLITFFTEE YRLNHLIFSY AKPYIALMDG VVMGGGMGIS QGASLRVVTE CTKMAMPETN IGLFPDVGGG WFLARVPGHV GEYLGVTGQM IEAADALSIG LADCHVTTAA LAAIVQRLRD GTWGSAEQIT ACFTEAASAP DDAKAIIAPH REAIDACFSQ SSVQGILADL AGSTDAEWAA QTAAHMVKRS PLMMAVTLEL IRRGRRTTLA DELRRELDMM THVFAEGDGI EGIRALAVDK DHAPKWKHAS IDAVRDDEVA AFFVSPWRRE QHPLLGLSD
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