Gene Rpic12D_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1216 
Symbol 
ID8018860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1292410 
End bp1292859 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content63% 
IMG OID644829998 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002981180 
Protein GI241662820 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.298093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGAAA GCGTTGGCTA CCTCGTGGGG CGCACCAAAA CCGCCCTGTC CATGGCCATC 
GAGCAGGAAG TTGCCGCGAT GGACGTCACG CACTCGCAGG CCAGTTGCCT GGTACTCCTT
GCCAACGGCC GTTGTCAGAC AGCCACCGAT CTCGGCCGCG AACTGAATAC AGACATCGGT
TCGCTGACCC GCATGCTCAG TCGCATGGAA AAGCGCGGCC TGATCGAGCG TGTGCGCAGC
GAGTCCGACC GCCGCGTGGT CCACCTGGAA GTGACCGAAG CCGGCCGTGA CTTGGCTGAC
CGCATGCCAG CCATCTACAC CCACGTGCTG AACCGTTTTT TCGCCGGCTT TACACCGAGT
GACGTCGATA CGCTGCGCGA GCTTCTCAAG CGCATTCTCA GCAACGGCGC CGCCACGGAC
GTTCATCGCG CGCGCCCTGC CGATCACTGA
 
Protein sequence
MCESVGYLVG RTKTALSMAI EQEVAAMDVT HSQASCLVLL ANGRCQTATD LGRELNTDIG 
SLTRMLSRME KRGLIERVRS ESDRRVVHLE VTEAGRDLAD RMPAIYTHVL NRFFAGFTPS
DVDTLRELLK RILSNGAATD VHRARPADH