| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1212 |
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| Symbol | truB |
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| ID | 8018856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1286879 |
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| End bp | 1287835 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829994 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002981176 |
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| Protein GI | 241662816 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.193622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGC ACCAAGTGCC CAGGCCCCAA AAGCCGCCGC GGCGTGATGT GCATGGCGTG
CTGCTCCTAG ACAAGCCGAT CGGCTGGTCG AGCAACGATG CGCTGATCCG CGCCAAACGC
CTGCTGTGGG CCAAGAAGGC GGGGCACACC GGCACGCTCG ATCCGCTTGC TACGGGCCTG
TTGCCCCTGT GTTTTGGCGA GGCGACCAAG TTTTCGCAGG ATCTGCTCGA TGCGGACAAG
ACGTACGAAA CCGTCGTGCG CCTCGGGATC AGGACGAGTA CCGCAGACGC GGAAGGCGAG
GTGCTGAGCG AGCGCCCGGT ATCGGTCACG CCCGAGCGAC TGCAGGCAGC CATCGCGCGC
TTCGTCGGCG AGATCGACCA GGTGCCGCCG ATGCACTCGG CGCTGAAGAA GGACGGCAAG
CCGCTGTACG AGTACGCCCG TGCGGGGCAA ACGGTGGAAC GTGCTGCGCG TCGGGTAACG
ATCTACGGGA TTGATCTGCT GGCAACCGAC CTGCAATCGG CCGAACCGAC GATCACGTTA
CGCGTGTCAT GCAGCAAAGG CACCTACATC CGTACGTTGG GTGAAGACAT TGGGGAGGCG
CTGGGCTGCG GCGGGCATCT GGTTGCGCTG CGTCGCACCC AGGTGGGCAA CCTCACGCTG
GACGGCGCCG TGACGCTCGA AGCGTTGGAC GCTGCTGCTG AAGATGCACG TGGTGCATTG
CTGGCGCCGG TCGATGCGCT GTTGCAGACA TTGCCGCGCG TGGAGCTGGA TGCGCAAGAG
AGCCGTCGCT TCCTGCATGG CCAGCGCTTG CCGTTGCAAT TGGCGTTGCC GAATGCTGAC
CAGGTGCGCG TCTACGGCGT GCGTGACGCG ATCGCGGCGG ATGCCACTGC GTCGCTGCTC
GGAGTGGCTG CCTGGCAAGG CGGTGTGCTC CGGCCGGAGC GGCTCGTGCA TCTTTGA
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| Protein sequence | MAEHQVPRPQ KPPRRDVHGV LLLDKPIGWS SNDALIRAKR LLWAKKAGHT GTLDPLATGL
LPLCFGEATK FSQDLLDADK TYETVVRLGI RTSTADAEGE VLSERPVSVT PERLQAAIAR
FVGEIDQVPP MHSALKKDGK PLYEYARAGQ TVERAARRVT IYGIDLLATD LQSAEPTITL
RVSCSKGTYI RTLGEDIGEA LGCGGHLVAL RRTQVGNLTL DGAVTLEALD AAAEDARGAL
LAPVDALLQT LPRVELDAQE SRRFLHGQRL PLQLALPNAD QVRVYGVRDA IAADATASLL
GVAAWQGGVL RPERLVHL
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