Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1195 |
Symbol | |
ID | 8018839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1268317 |
End bp | 1270860 |
Gene Length | 2544 bp |
Protein Length | 847 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644829977 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_002981159 |
Protein GI | 241662799 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGA CATTCGCCCC CATCCATCCA ACCGCGCCGG TTGCCGGTAA AGGCTCGCCT GTTGGCCCGA GCGGGGCAGG CGCGTCGCAC ATCACCTGCT ATCACTGCGC GTCGCCTCTG GAGGGCGCCA CCGCTGTCCA TGCTGACATC GGCGGCAAGT CTCGGGAATT TTGCTGTGCC GGCTGCCAGG CTGTCGCGCA GACGCTGCAC GCCTCCGGCA TGGGCCACGT CTATGACGGC CCGATCGCCT TCGCCAAGCC CATCGAAGGG GACCGCCGCA CAGAAGCCGA AGCGGTTTGG GCGACCTACG ATCTGCCGGT CATGCGTGAG CGCTTCGTGC GCACACGCGC TGACGGTGCG GAAGAACTTT CCCTCGCCAT CAGCGGCATG CGTTGCGCCG CATGTGTGTG GCTGATCGAG CGTGCGCTTT CGCGGGTGCC GGGCATGCGT GAAGCCACCG TCAATTACGC CACGGAACGC GCGCGCATCG TCGGAGATGC AGGGGTGATA CGGTTGTCCG CGGTGTTTGC CGCCATTGCC GACGTCGGAT ATGAAGCGTG GCCGGACCAG CCATCCGCGC GCCGCACTGC CGAGGCGCGC GAACGCCGCA GCCTGCTGAT CCGCTTGGGA TTGGCAATGC TGGGCATGAT GCAAGTCATG ATGTACGCGT GGCCGGTGTA CCTGCATGGT GGCGACATCC CCGTGAACCA GACCCGCCTG ATGCAGTGGG CCAGCCTGGT GCTGACGGTG CCGGTGGTGT TGATTTCTGC GCGGCCCATT TTCATCAACG CGTGGCGGCA AGTGAGGCAC GCGCACGTCG GCATGGACGC GCCCGTGGCG CTGGGGATCG GTGCCGCCTT CATTGCCAGC GTATTCGCCA CCTTGCGCGG CCATGGCGAA ACGTATTTCG ATTCGGTGAC GATGTTCGTC GCTTTCCTGT TGGCCGCGCG TTATCTCGAA CTGCGTGCGC GGCAGAGCGC AGCTTCGGGC GCCGAGGCAT TGGTCCGTCA GTTGCCGGCT ACCTGCCGGC GCTTCAACGC CGTAAGCGGC GCCCTCGAAA CGATCCCTGT TGCTACCTTG CAGCAAGGCG ACTGCGTGGA AGTGCGCGCC GGTGAGGTCC TGCCTGCAGA CGGAACCATT GAACACGGCA CCACCGAGAT CGACGAATCG CTTCTCTCGG GTGAAAGCGT GCCGCGTCCG CGCGACGTGG GCGCGACCGT GCTGGCAGGC AGCTACAACG TGGTCAGCGC CATTCGTGTG CGTGTGAACC GCGTGGGCAC CCAGACGCGC CTTGCCGCCA TCGTCGATCT GCTCGAACGC GCCTTGACCG ATAAGCCCCG CATGGCTGAA CTCGCCGATC GTGTCGCCGG GCGCTTTGTG GCAGTGCTGC TCGGCTGGGC GCTGCTCACC GCGATCGCGT GGTGGTGGAT CGATCCGACA CGCGTGTTTG CGGTCACTGT GGCGGTGCTT GTGGTGAGCT GCCCATGCGC GCTGTCGCTC GCCACACCGT CTGCGCTGGC GGCGGCCAGC GGTGCGCTGG CACGGCGGGG TGTGCTGGTC ACGCGGGGCC ACGCCATCGA GAGCCTGGCA GCCGTGACGG ATGTGCTGCT CGACAAGACC GGCACGCTCA CCGAGGGGCG TTTGCGCTTG CTGAGCATCG AGACCTTCGC CGATGTGGAT GCCGAGCACT GTCTTGCATT GGCATGCGCG ATGGAGCAAT CCGAGAACCA TCCGATCGCC CAGTCGTTAC GCGCCGGCAC CTCGAATGCA ATGCCGCTGC CCACGTTGGG GCGCGTGAAA AACGTGCCGG GGCAGGGCGT GTATGCCATG GCGGAGAACC GCTTGATGCG TCTGGGCACG CAGTCGTTTG CGGCCACGCA CTACGCAAAC CAGCCGGTTG CCACCATCCG TTACGGCGCG GAAGCACCAA TGGAGGAGGT GCCGCCGGCG GCCGCATGCA CGTCGGTCTG GCTCGGCCGC GATGGCCAAC CGCTCGCGCG CTTCACGCTG GCCGATACGC CACGCGCCGA CGCGCCTGCA TGCCTGGGCG CGTTGCGTGC ACAAGGATTG CGCTTGCATC TCGTTTCCGG CGATGCGCCT GAAACCGTGC ACTGGTGGGC CAACCGCCTG GGCATCGACC ACGCCGTGGG CGGGTCCAGC CCCGAAGACA AGCGCGCCTA CGTGCATAAG CTGCAGGCAG ACGGCGCCCG CGTGCTGGCC GTCGGCGATG GCATCAACGA TGCGCCGTTG CTCGCACAGG CGCAGGTCTC CATCGCCATT GGATCAGGTG CGCCGTTGGC TCAGGCCGGT GCCGATGCCA TCCTGACCGA ACCGCGTCTG ATTGCCATCA GCGAGGCCGT GTCGATTGGC CGCCGCGCGT TGCGCGTGGT GCGCCAGAAC CTCGGCTGGG CCTTTGCCTA TAACGCGATC AGCATCCCGA TGGCCACGCT CGGGTGGCTC TCGCCGCTGG CCGCTGGCAT CGGCATGTCG GTGTCATCGC TGCTGGTGGC GCTCAATGCG TGGCGCCTGT CGCGCGCGGT CTAG
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Protein sequence | MTTTFAPIHP TAPVAGKGSP VGPSGAGASH ITCYHCASPL EGATAVHADI GGKSREFCCA GCQAVAQTLH ASGMGHVYDG PIAFAKPIEG DRRTEAEAVW ATYDLPVMRE RFVRTRADGA EELSLAISGM RCAACVWLIE RALSRVPGMR EATVNYATER ARIVGDAGVI RLSAVFAAIA DVGYEAWPDQ PSARRTAEAR ERRSLLIRLG LAMLGMMQVM MYAWPVYLHG GDIPVNQTRL MQWASLVLTV PVVLISARPI FINAWRQVRH AHVGMDAPVA LGIGAAFIAS VFATLRGHGE TYFDSVTMFV AFLLAARYLE LRARQSAASG AEALVRQLPA TCRRFNAVSG ALETIPVATL QQGDCVEVRA GEVLPADGTI EHGTTEIDES LLSGESVPRP RDVGATVLAG SYNVVSAIRV RVNRVGTQTR LAAIVDLLER ALTDKPRMAE LADRVAGRFV AVLLGWALLT AIAWWWIDPT RVFAVTVAVL VVSCPCALSL ATPSALAAAS GALARRGVLV TRGHAIESLA AVTDVLLDKT GTLTEGRLRL LSIETFADVD AEHCLALACA MEQSENHPIA QSLRAGTSNA MPLPTLGRVK NVPGQGVYAM AENRLMRLGT QSFAATHYAN QPVATIRYGA EAPMEEVPPA AACTSVWLGR DGQPLARFTL ADTPRADAPA CLGALRAQGL RLHLVSGDAP ETVHWWANRL GIDHAVGGSS PEDKRAYVHK LQADGARVLA VGDGINDAPL LAQAQVSIAI GSGAPLAQAG ADAILTEPRL IAISEAVSIG RRALRVVRQN LGWAFAYNAI SIPMATLGWL SPLAAGIGMS VSSLLVALNA WRLSRAV
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