Gene Rpic12D_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1195 
Symbol 
ID8018839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1268317 
End bp1270860 
Gene Length2544 bp 
Protein Length847 aa 
Translation table11 
GC content67% 
IMG OID644829977 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_002981159 
Protein GI241662799 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA CATTCGCCCC CATCCATCCA ACCGCGCCGG TTGCCGGTAA AGGCTCGCCT 
GTTGGCCCGA GCGGGGCAGG CGCGTCGCAC ATCACCTGCT ATCACTGCGC GTCGCCTCTG
GAGGGCGCCA CCGCTGTCCA TGCTGACATC GGCGGCAAGT CTCGGGAATT TTGCTGTGCC
GGCTGCCAGG CTGTCGCGCA GACGCTGCAC GCCTCCGGCA TGGGCCACGT CTATGACGGC
CCGATCGCCT TCGCCAAGCC CATCGAAGGG GACCGCCGCA CAGAAGCCGA AGCGGTTTGG
GCGACCTACG ATCTGCCGGT CATGCGTGAG CGCTTCGTGC GCACACGCGC TGACGGTGCG
GAAGAACTTT CCCTCGCCAT CAGCGGCATG CGTTGCGCCG CATGTGTGTG GCTGATCGAG
CGTGCGCTTT CGCGGGTGCC GGGCATGCGT GAAGCCACCG TCAATTACGC CACGGAACGC
GCGCGCATCG TCGGAGATGC AGGGGTGATA CGGTTGTCCG CGGTGTTTGC CGCCATTGCC
GACGTCGGAT ATGAAGCGTG GCCGGACCAG CCATCCGCGC GCCGCACTGC CGAGGCGCGC
GAACGCCGCA GCCTGCTGAT CCGCTTGGGA TTGGCAATGC TGGGCATGAT GCAAGTCATG
ATGTACGCGT GGCCGGTGTA CCTGCATGGT GGCGACATCC CCGTGAACCA GACCCGCCTG
ATGCAGTGGG CCAGCCTGGT GCTGACGGTG CCGGTGGTGT TGATTTCTGC GCGGCCCATT
TTCATCAACG CGTGGCGGCA AGTGAGGCAC GCGCACGTCG GCATGGACGC GCCCGTGGCG
CTGGGGATCG GTGCCGCCTT CATTGCCAGC GTATTCGCCA CCTTGCGCGG CCATGGCGAA
ACGTATTTCG ATTCGGTGAC GATGTTCGTC GCTTTCCTGT TGGCCGCGCG TTATCTCGAA
CTGCGTGCGC GGCAGAGCGC AGCTTCGGGC GCCGAGGCAT TGGTCCGTCA GTTGCCGGCT
ACCTGCCGGC GCTTCAACGC CGTAAGCGGC GCCCTCGAAA CGATCCCTGT TGCTACCTTG
CAGCAAGGCG ACTGCGTGGA AGTGCGCGCC GGTGAGGTCC TGCCTGCAGA CGGAACCATT
GAACACGGCA CCACCGAGAT CGACGAATCG CTTCTCTCGG GTGAAAGCGT GCCGCGTCCG
CGCGACGTGG GCGCGACCGT GCTGGCAGGC AGCTACAACG TGGTCAGCGC CATTCGTGTG
CGTGTGAACC GCGTGGGCAC CCAGACGCGC CTTGCCGCCA TCGTCGATCT GCTCGAACGC
GCCTTGACCG ATAAGCCCCG CATGGCTGAA CTCGCCGATC GTGTCGCCGG GCGCTTTGTG
GCAGTGCTGC TCGGCTGGGC GCTGCTCACC GCGATCGCGT GGTGGTGGAT CGATCCGACA
CGCGTGTTTG CGGTCACTGT GGCGGTGCTT GTGGTGAGCT GCCCATGCGC GCTGTCGCTC
GCCACACCGT CTGCGCTGGC GGCGGCCAGC GGTGCGCTGG CACGGCGGGG TGTGCTGGTC
ACGCGGGGCC ACGCCATCGA GAGCCTGGCA GCCGTGACGG ATGTGCTGCT CGACAAGACC
GGCACGCTCA CCGAGGGGCG TTTGCGCTTG CTGAGCATCG AGACCTTCGC CGATGTGGAT
GCCGAGCACT GTCTTGCATT GGCATGCGCG ATGGAGCAAT CCGAGAACCA TCCGATCGCC
CAGTCGTTAC GCGCCGGCAC CTCGAATGCA ATGCCGCTGC CCACGTTGGG GCGCGTGAAA
AACGTGCCGG GGCAGGGCGT GTATGCCATG GCGGAGAACC GCTTGATGCG TCTGGGCACG
CAGTCGTTTG CGGCCACGCA CTACGCAAAC CAGCCGGTTG CCACCATCCG TTACGGCGCG
GAAGCACCAA TGGAGGAGGT GCCGCCGGCG GCCGCATGCA CGTCGGTCTG GCTCGGCCGC
GATGGCCAAC CGCTCGCGCG CTTCACGCTG GCCGATACGC CACGCGCCGA CGCGCCTGCA
TGCCTGGGCG CGTTGCGTGC ACAAGGATTG CGCTTGCATC TCGTTTCCGG CGATGCGCCT
GAAACCGTGC ACTGGTGGGC CAACCGCCTG GGCATCGACC ACGCCGTGGG CGGGTCCAGC
CCCGAAGACA AGCGCGCCTA CGTGCATAAG CTGCAGGCAG ACGGCGCCCG CGTGCTGGCC
GTCGGCGATG GCATCAACGA TGCGCCGTTG CTCGCACAGG CGCAGGTCTC CATCGCCATT
GGATCAGGTG CGCCGTTGGC TCAGGCCGGT GCCGATGCCA TCCTGACCGA ACCGCGTCTG
ATTGCCATCA GCGAGGCCGT GTCGATTGGC CGCCGCGCGT TGCGCGTGGT GCGCCAGAAC
CTCGGCTGGG CCTTTGCCTA TAACGCGATC AGCATCCCGA TGGCCACGCT CGGGTGGCTC
TCGCCGCTGG CCGCTGGCAT CGGCATGTCG GTGTCATCGC TGCTGGTGGC GCTCAATGCG
TGGCGCCTGT CGCGCGCGGT CTAG
 
Protein sequence
MTTTFAPIHP TAPVAGKGSP VGPSGAGASH ITCYHCASPL EGATAVHADI GGKSREFCCA 
GCQAVAQTLH ASGMGHVYDG PIAFAKPIEG DRRTEAEAVW ATYDLPVMRE RFVRTRADGA
EELSLAISGM RCAACVWLIE RALSRVPGMR EATVNYATER ARIVGDAGVI RLSAVFAAIA
DVGYEAWPDQ PSARRTAEAR ERRSLLIRLG LAMLGMMQVM MYAWPVYLHG GDIPVNQTRL
MQWASLVLTV PVVLISARPI FINAWRQVRH AHVGMDAPVA LGIGAAFIAS VFATLRGHGE
TYFDSVTMFV AFLLAARYLE LRARQSAASG AEALVRQLPA TCRRFNAVSG ALETIPVATL
QQGDCVEVRA GEVLPADGTI EHGTTEIDES LLSGESVPRP RDVGATVLAG SYNVVSAIRV
RVNRVGTQTR LAAIVDLLER ALTDKPRMAE LADRVAGRFV AVLLGWALLT AIAWWWIDPT
RVFAVTVAVL VVSCPCALSL ATPSALAAAS GALARRGVLV TRGHAIESLA AVTDVLLDKT
GTLTEGRLRL LSIETFADVD AEHCLALACA MEQSENHPIA QSLRAGTSNA MPLPTLGRVK
NVPGQGVYAM AENRLMRLGT QSFAATHYAN QPVATIRYGA EAPMEEVPPA AACTSVWLGR
DGQPLARFTL ADTPRADAPA CLGALRAQGL RLHLVSGDAP ETVHWWANRL GIDHAVGGSS
PEDKRAYVHK LQADGARVLA VGDGINDAPL LAQAQVSIAI GSGAPLAQAG ADAILTEPRL
IAISEAVSIG RRALRVVRQN LGWAFAYNAI SIPMATLGWL SPLAAGIGMS VSSLLVALNA
WRLSRAV