Gene Rpic12D_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1181 
Symbol 
ID8018825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1250550 
End bp1251749 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content63% 
IMG OID644829963 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_002981145 
Protein GI241662785 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAC TGATCCGCAA AGCGGCACGC CGCGATGAAC AGGAACAGAC GACGCCATCT 
GCGCCGTCAG CGTCCGCCGC GCGTGAGGCG GCAGCGGGCG AGCCCATCGA CGGGCCGCCA
CCCATTCCGT TTTCACATGG CGCGCCGCCA TTGTTCCCTG GGCTCGACGC GGCGCCCAAT
CCCATCCTCT TCGTCCGCCA TCCGGCGCTG ACAATCTTCT ACGCCAATCC CGCCGCGGAA
GCCGCCCTGG CCGTGTCACG CCGGCAGTTG GTGGAGATGT CGCTGTACGA GCTGTTTGCC
GACCCGTCCG AACTGGCCGA GATGATTGCC ACCGTGGCAG CCCGCCAATT CGATGCCAAG
CGGCGCGACG TCTCGCTCGA CCGTTTGGGC CACGAACCGC TGCACGCGCA CGCCGTCGTT
GGCGCACTCG ACTTTGCGCC TGCGTCAGTG CTGCTTGAGC TGCTGCCCAA CGAGCAGAAG
ATTCGCAGCG AGCGCGAAGA GCGCCTGCTG GACCTGACCT CCGCCAACAA AGAGCTGATC
CGCAATCTGG CACACGAGAT CAAGAATCCG TTGGGCGGCA TTCGCGGCGC GGCGCAGTTG
CTGGAGTTCG AACTGCCGGA ACGTTCGCTG CGCGAGTACA CGCAAGTCAT CATCAAGGAA
TCCGACCGCC TGCAGACGCT GGTCGATCGC CTGCTCGAAC CACACCGGCA TCCGCATATC
GTTGGCGATG TGAACATCCA CGAGGTGCTG GAGCGCGTGC GCTCGGTGGT GCTGGCGGAG
TTCCCGCAGG GCTTGCATAT CGTGCGCGAC TACGACGCGA GTCTGCCGGA GTTTCGCGGT
GACAAGGAGC AGCTCATCCA GGCGGTGCTC AACATCGTGC ACAACGCGGC GCATGCGCTT
GGCGCTCGGA TTGCGCAGGG CGACGGCGAA ATCATTCTGC GCACGCGCGT TGCGCGCAAA
GTTACGATTG CAAAGCGTCT TTACAAGCTG GCATTGGACT TGCATGTAGT GGACAACGGT
CCTGGTATCC CGGACGACAT CCGCGAGCGA ATCTTTTTCC CGCTGGTGTC AGGAAGGGAG
GGGGGAAGTG GGCTGGGTCT GACACTCGCG CAGACGTTCG TGCAGCAGCA TGACGGCCTG
ATTGAATGCG AGAGCAGGCC AGGTCAGACG GATTTCCGCA TTCTCGTACC GCTGCACTGA
 
Protein sequence
MRRLIRKAAR RDEQEQTTPS APSASAAREA AAGEPIDGPP PIPFSHGAPP LFPGLDAAPN 
PILFVRHPAL TIFYANPAAE AALAVSRRQL VEMSLYELFA DPSELAEMIA TVAARQFDAK
RRDVSLDRLG HEPLHAHAVV GALDFAPASV LLELLPNEQK IRSEREERLL DLTSANKELI
RNLAHEIKNP LGGIRGAAQL LEFELPERSL REYTQVIIKE SDRLQTLVDR LLEPHRHPHI
VGDVNIHEVL ERVRSVVLAE FPQGLHIVRD YDASLPEFRG DKEQLIQAVL NIVHNAAHAL
GARIAQGDGE IILRTRVARK VTIAKRLYKL ALDLHVVDNG PGIPDDIRER IFFPLVSGRE
GGSGLGLTLA QTFVQQHDGL IECESRPGQT DFRILVPLH